Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Trav2Q5R1I9 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Trav2Q5R1I9 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Trav2Q5R1I9 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav2Q5R1I9 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav2Q5R1I9 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav2Q5R1I9 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav2Q5R1I9 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav2Q5R1I9 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Trav2Q5R1I9 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav2Q5R1I9 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav2Q5R1I9 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
Trav2Q5R1I9 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav2Q5R1I9 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav2Q5R1I9 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav2Q5R1I9 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav2Q5R1I9 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav2Q5R1I9 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav2Q5R1I9 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav2Q5R1I9 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav2Q5R1I9 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav2Q5R1I9 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav2Q5R1I9 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav2Q5R1I9 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav2Q5R1I9 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav2Q5R1I9 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav2Q5R1I9 Gm27275-201ENSMUST00000184318 272 ntBASIC14.59□□□□□ -0.07
Trav2Q5R1I9 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC14.59□□□□□ -0.07
Trav2Q5R1I9 AC140264.2-202ENSMUST00000218746 817 ntBASIC14.59□□□□□ -0.07
Trav2Q5R1I9 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav2Q5R1I9 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Trav2Q5R1I9 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav2Q5R1I9 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav2Q5R1I9 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav2Q5R1I9 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav2Q5R1I9 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav2Q5R1I9 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav2Q5R1I9 Dio3-201ENSMUST00000097228 1449 ntBASIC14.58□□□□□ -0.07
Trav2Q5R1I9 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Trav2Q5R1I9 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav2Q5R1I9 Gm2399-201ENSMUST00000104944 225 ntBASIC14.58□□□□□ -0.08
Trav2Q5R1I9 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Trav2Q5R1I9 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav2Q5R1I9 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC14.58□□□□□ -0.08
Trav2Q5R1I9 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC14.58□□□□□ -0.08
Trav2Q5R1I9 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC14.58□□□□□ -0.08
Trav2Q5R1I9 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav2Q5R1I9 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Trav2Q5R1I9 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav2Q5R1I9 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav2Q5R1I9 Gm21596-201ENSMUST00000178049 1316 ntBASIC14.58□□□□□ -0.08
Trav2Q5R1I9 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC14.58□□□□□ -0.08
Trav2Q5R1I9 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav2Q5R1I9 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav2Q5R1I9 Gm8309-201ENSMUST00000206627 1448 ntBASIC14.58□□□□□ -0.08
Trav2Q5R1I9 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav2Q5R1I9 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC14.58□□□□□ -0.08
Trav2Q5R1I9 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav2Q5R1I9 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav2Q5R1I9 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC14.57□□□□□ -0.08
Trav2Q5R1I9 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav2Q5R1I9 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav2Q5R1I9 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav2Q5R1I9 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC14.57□□□□□ -0.08
Trav2Q5R1I9 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav2Q5R1I9 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav2Q5R1I9 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav2Q5R1I9 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav2Q5R1I9 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav2Q5R1I9 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav2Q5R1I9 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav2Q5R1I9 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav2Q5R1I9 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC14.57□□□□□ -0.08
Trav2Q5R1I9 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav2Q5R1I9 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav2Q5R1I9 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav2Q5R1I9 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav2Q5R1I9 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC14.56□□□□□ -0.08
Trav2Q5R1I9 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav2Q5R1I9 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav2Q5R1I9 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trav2Q5R1I9 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav2Q5R1I9 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC14.56□□□□□ -0.08
Trav2Q5R1I9 Gm22325-201ENSMUST00000158904 308 ntBASIC14.56□□□□□ -0.08
Trav2Q5R1I9 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav2Q5R1I9 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav2Q5R1I9 Gm10812-201ENSMUST00000099864 546 ntBASIC14.56□□□□□ -0.08
Trav2Q5R1I9 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav2Q5R1I9 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav2Q5R1I9 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav2Q5R1I9 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav2Q5R1I9 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav2Q5R1I9 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
Trav2Q5R1I9 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav2Q5R1I9 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav2Q5R1I9 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Trav2Q5R1I9 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav2Q5R1I9 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav2Q5R1I9 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav2Q5R1I9 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms