Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav5d-4Q5R1F6 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav5d-4Q5R1F6 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav5d-4Q5R1F6 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav5d-4Q5R1F6 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav5d-4Q5R1F6 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Trav5d-4Q5R1F6 Ap3s1-204ENSMUST00000225520 957 ntBASIC15.76■□□□□ 0.11
Trav5d-4Q5R1F6 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Trav5d-4Q5R1F6 Gm5874-201ENSMUST00000096101 508 ntBASIC15.76■□□□□ 0.11
Trav5d-4Q5R1F6 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav5d-4Q5R1F6 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav5d-4Q5R1F6 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav5d-4Q5R1F6 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav5d-4Q5R1F6 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav5d-4Q5R1F6 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav5d-4Q5R1F6 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC15.76■□□□□ 0.11
Trav5d-4Q5R1F6 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav5d-4Q5R1F6 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav5d-4Q5R1F6 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav5d-4Q5R1F6 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav5d-4Q5R1F6 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav5d-4Q5R1F6 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC15.76■□□□□ 0.11
Trav5d-4Q5R1F6 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Trav5d-4Q5R1F6 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav5d-4Q5R1F6 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav5d-4Q5R1F6 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav5d-4Q5R1F6 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC15.75■□□□□ 0.11
Trav5d-4Q5R1F6 Gm42642-201ENSMUST00000200683 355 ntBASIC15.75■□□□□ 0.11
Trav5d-4Q5R1F6 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC15.75■□□□□ 0.11
Trav5d-4Q5R1F6 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav5d-4Q5R1F6 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Trav5d-4Q5R1F6 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav5d-4Q5R1F6 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav5d-4Q5R1F6 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav5d-4Q5R1F6 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav5d-4Q5R1F6 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav5d-4Q5R1F6 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav5d-4Q5R1F6 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav5d-4Q5R1F6 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav5d-4Q5R1F6 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav5d-4Q5R1F6 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav5d-4Q5R1F6 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav5d-4Q5R1F6 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav5d-4Q5R1F6 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav5d-4Q5R1F6 Gm35558-201ENSMUST00000222675 2219 ntBASIC15.74■□□□□ 0.11
Trav5d-4Q5R1F6 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav5d-4Q5R1F6 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav5d-4Q5R1F6 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC15.74■□□□□ 0.11
Trav5d-4Q5R1F6 Gm18671-201ENSMUST00000214826 683 ntBASIC15.74■□□□□ 0.11
Trav5d-4Q5R1F6 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Trav5d-4Q5R1F6 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav5d-4Q5R1F6 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav5d-4Q5R1F6 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Trav5d-4Q5R1F6 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Trav5d-4Q5R1F6 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC15.74■□□□□ 0.11
Trav5d-4Q5R1F6 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav5d-4Q5R1F6 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav5d-4Q5R1F6 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav5d-4Q5R1F6 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav5d-4Q5R1F6 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav5d-4Q5R1F6 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav5d-4Q5R1F6 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav5d-4Q5R1F6 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Trav5d-4Q5R1F6 Gm10033-202ENSMUST00000211874 928 ntBASIC15.73■□□□□ 0.11
Trav5d-4Q5R1F6 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav5d-4Q5R1F6 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav5d-4Q5R1F6 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Trav5d-4Q5R1F6 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav5d-4Q5R1F6 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav5d-4Q5R1F6 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav5d-4Q5R1F6 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav5d-4Q5R1F6 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav5d-4Q5R1F6 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav5d-4Q5R1F6 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Trav5d-4Q5R1F6 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC15.72■□□□□ 0.11
Trav5d-4Q5R1F6 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav5d-4Q5R1F6 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Trav5d-4Q5R1F6 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Trav5d-4Q5R1F6 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav5d-4Q5R1F6 Gm45906-201ENSMUST00000208911 1430 ntBASIC15.72■□□□□ 0.11
Trav5d-4Q5R1F6 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC15.72■□□□□ 0.11
Trav5d-4Q5R1F6 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Trav5d-4Q5R1F6 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav5d-4Q5R1F6 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav5d-4Q5R1F6 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav5d-4Q5R1F6 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav5d-4Q5R1F6 Gm6420-201ENSMUST00000193885 723 ntBASIC15.72■□□□□ 0.11
Trav5d-4Q5R1F6 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC15.72■□□□□ 0.11
Trav5d-4Q5R1F6 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC15.72■□□□□ 0.11
Trav5d-4Q5R1F6 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav5d-4Q5R1F6 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav5d-4Q5R1F6 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav5d-4Q5R1F6 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav5d-4Q5R1F6 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav5d-4Q5R1F6 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav5d-4Q5R1F6 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav5d-4Q5R1F6 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav5d-4Q5R1F6 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
Trav5d-4Q5R1F6 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC15.72■□□□□ 0.11
Trav5d-4Q5R1F6 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms