Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Vps13aQ5H8C4 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps13aQ5H8C4 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps13aQ5H8C4 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Vps13aQ5H8C4 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC18.31■□□□□ 0.52
Vps13aQ5H8C4 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps13aQ5H8C4 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Vps13aQ5H8C4 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps13aQ5H8C4 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Vps13aQ5H8C4 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps13aQ5H8C4 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vps13aQ5H8C4 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vps13aQ5H8C4 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vps13aQ5H8C4 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Vps13aQ5H8C4 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vps13aQ5H8C4 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vps13aQ5H8C4 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vps13aQ5H8C4 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC18.3■□□□□ 0.52
Vps13aQ5H8C4 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Vps13aQ5H8C4 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vps13aQ5H8C4 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vps13aQ5H8C4 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vps13aQ5H8C4 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC18.3■□□□□ 0.52
Vps13aQ5H8C4 Gm12382-201ENSMUST00000122005 922 ntBASIC18.3■□□□□ 0.52
Vps13aQ5H8C4 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vps13aQ5H8C4 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps13aQ5H8C4 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps13aQ5H8C4 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC18.29■□□□□ 0.52
Vps13aQ5H8C4 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps13aQ5H8C4 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps13aQ5H8C4 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Vps13aQ5H8C4 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps13aQ5H8C4 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps13aQ5H8C4 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.29■□□□□ 0.52
Vps13aQ5H8C4 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps13aQ5H8C4 Gm27704-201ENSMUST00000185094 107 ntBASIC18.29■□□□□ 0.52
Vps13aQ5H8C4 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.29■□□□□ 0.52
Vps13aQ5H8C4 Gm43514-201ENSMUST00000198852 424 ntBASIC18.29■□□□□ 0.52
Vps13aQ5H8C4 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps13aQ5H8C4 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps13aQ5H8C4 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps13aQ5H8C4 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps13aQ5H8C4 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps13aQ5H8C4 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.28■□□□□ 0.52
Vps13aQ5H8C4 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vps13aQ5H8C4 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vps13aQ5H8C4 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.28■□□□□ 0.52
Vps13aQ5H8C4 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC18.28■□□□□ 0.52
Vps13aQ5H8C4 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.28■□□□□ 0.52
Vps13aQ5H8C4 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vps13aQ5H8C4 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vps13aQ5H8C4 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vps13aQ5H8C4 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vps13aQ5H8C4 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vps13aQ5H8C4 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC18.28■□□□□ 0.52
Vps13aQ5H8C4 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Vps13aQ5H8C4 Gm10138-203ENSMUST00000206952 366 ntBASIC18.28■□□□□ 0.52
Vps13aQ5H8C4 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vps13aQ5H8C4 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vps13aQ5H8C4 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vps13aQ5H8C4 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vps13aQ5H8C4 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vps13aQ5H8C4 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Vps13aQ5H8C4 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Vps13aQ5H8C4 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Vps13aQ5H8C4 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.26■□□□□ 0.51
Vps13aQ5H8C4 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vps13aQ5H8C4 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Vps13aQ5H8C4 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Vps13aQ5H8C4 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vps13aQ5H8C4 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vps13aQ5H8C4 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vps13aQ5H8C4 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vps13aQ5H8C4 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vps13aQ5H8C4 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vps13aQ5H8C4 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vps13aQ5H8C4 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Vps13aQ5H8C4 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vps13aQ5H8C4 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Vps13aQ5H8C4 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vps13aQ5H8C4 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Vps13aQ5H8C4 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vps13aQ5H8C4 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC18.26■□□□□ 0.51
Vps13aQ5H8C4 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC18.26■□□□□ 0.51
Vps13aQ5H8C4 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.26■□□□□ 0.51
Vps13aQ5H8C4 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vps13aQ5H8C4 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vps13aQ5H8C4 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vps13aQ5H8C4 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Vps13aQ5H8C4 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vps13aQ5H8C4 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vps13aQ5H8C4 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Vps13aQ5H8C4 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vps13aQ5H8C4 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Vps13aQ5H8C4 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.25■□□□□ 0.51
Vps13aQ5H8C4 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.25■□□□□ 0.51
Vps13aQ5H8C4 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vps13aQ5H8C4 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.25■□□□□ 0.51
Vps13aQ5H8C4 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Vps13aQ5H8C4 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms