Protein–RNA interactions for Protein: Q52KI8

Srrm1, Serine/arginine repetitive matrix protein 1, mousemouse

Known RBP Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm1Q52KI8 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.57■□□□□ 0.88
Srrm1Q52KI8 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC20.57■□□□□ 0.88
Srrm1Q52KI8 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Srrm1Q52KI8 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Srrm1Q52KI8 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Srrm1Q52KI8 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Srrm1Q52KI8 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Srrm1Q52KI8 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Srrm1Q52KI8 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Srrm1Q52KI8 Gm27741-201ENSMUST00000185060 237 ntBASIC20.56■□□□□ 0.88
Srrm1Q52KI8 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Srrm1Q52KI8 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Srrm1Q52KI8 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Srrm1Q52KI8 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Srrm1Q52KI8 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Srrm1Q52KI8 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Srrm1Q52KI8 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Srrm1Q52KI8 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Srrm1Q52KI8 Gm18025-201ENSMUST00000221733 862 ntBASIC20.55■□□□□ 0.88
Srrm1Q52KI8 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Srrm1Q52KI8 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Srrm1Q52KI8 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Srrm1Q52KI8 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Srrm1Q52KI8 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Srrm1Q52KI8 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Srrm1Q52KI8 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Srrm1Q52KI8 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Srrm1Q52KI8 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Srrm1Q52KI8 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Srrm1Q52KI8 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Srrm1Q52KI8 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Srrm1Q52KI8 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Srrm1Q52KI8 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Srrm1Q52KI8 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC20.54■□□□□ 0.88
Srrm1Q52KI8 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Srrm1Q52KI8 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Srrm1Q52KI8 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Srrm1Q52KI8 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Srrm1Q52KI8 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Srrm1Q52KI8 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Srrm1Q52KI8 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Srrm1Q52KI8 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
Srrm1Q52KI8 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Srrm1Q52KI8 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Srrm1Q52KI8 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Srrm1Q52KI8 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC20.53■□□□□ 0.88
Srrm1Q52KI8 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Srrm1Q52KI8 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
Srrm1Q52KI8 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Srrm1Q52KI8 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Srrm1Q52KI8 AC124581.1-201ENSMUST00000225416 1399 ntBASIC20.53■□□□□ 0.88
Srrm1Q52KI8 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Srrm1Q52KI8 Gm45560-201ENSMUST00000211492 1472 ntBASIC20.53■□□□□ 0.88
Srrm1Q52KI8 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Srrm1Q52KI8 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Srrm1Q52KI8 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.53■□□□□ 0.88
Srrm1Q52KI8 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Srrm1Q52KI8 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Srrm1Q52KI8 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.52■□□□□ 0.88
Srrm1Q52KI8 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Srrm1Q52KI8 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Srrm1Q52KI8 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Srrm1Q52KI8 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Srrm1Q52KI8 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Srrm1Q52KI8 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Srrm1Q52KI8 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Srrm1Q52KI8 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
Srrm1Q52KI8 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
Srrm1Q52KI8 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC20.52■□□□□ 0.88
Srrm1Q52KI8 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Srrm1Q52KI8 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Srrm1Q52KI8 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC20.52■□□□□ 0.88
Srrm1Q52KI8 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Srrm1Q52KI8 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.52■□□□□ 0.88
Srrm1Q52KI8 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Srrm1Q52KI8 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Srrm1Q52KI8 Gm7712-202ENSMUST00000222331 1510 ntBASIC20.52■□□□□ 0.87
Srrm1Q52KI8 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Srrm1Q52KI8 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
Srrm1Q52KI8 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.52■□□□□ 0.87
Srrm1Q52KI8 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Srrm1Q52KI8 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Srrm1Q52KI8 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Srrm1Q52KI8 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.51■□□□□ 0.87
Srrm1Q52KI8 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Srrm1Q52KI8 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Srrm1Q52KI8 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC20.51■□□□□ 0.87
Srrm1Q52KI8 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Srrm1Q52KI8 Gm37292-201ENSMUST00000192062 758 ntBASIC20.51■□□□□ 0.87
Srrm1Q52KI8 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.51■□□□□ 0.87
Srrm1Q52KI8 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Srrm1Q52KI8 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Srrm1Q52KI8 Zfp783-201ENSMUST00000095946 670 ntBASIC20.51■□□□□ 0.87
Srrm1Q52KI8 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Srrm1Q52KI8 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Srrm1Q52KI8 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.5■□□□□ 0.87
Srrm1Q52KI8 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Srrm1Q52KI8 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Srrm1Q52KI8 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Srrm1Q52KI8 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms