Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Nlrc4Q3UP24 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.31■□□□□ 0.68
Nlrc4Q3UP24 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nlrc4Q3UP24 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nlrc4Q3UP24 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nlrc4Q3UP24 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Nlrc4Q3UP24 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Nlrc4Q3UP24 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Nlrc4Q3UP24 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nlrc4Q3UP24 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nlrc4Q3UP24 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nlrc4Q3UP24 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nlrc4Q3UP24 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nlrc4Q3UP24 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.3■□□□□ 0.68
Nlrc4Q3UP24 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nlrc4Q3UP24 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nlrc4Q3UP24 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nlrc4Q3UP24 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nlrc4Q3UP24 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Nlrc4Q3UP24 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nlrc4Q3UP24 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.29■□□□□ 0.68
Nlrc4Q3UP24 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nlrc4Q3UP24 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Nlrc4Q3UP24 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.29■□□□□ 0.68
Nlrc4Q3UP24 Gm12527-201ENSMUST00000117967 564 ntBASIC19.29■□□□□ 0.68
Nlrc4Q3UP24 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.29■□□□□ 0.68
Nlrc4Q3UP24 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Nlrc4Q3UP24 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Nlrc4Q3UP24 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Nlrc4Q3UP24 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nlrc4Q3UP24 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nlrc4Q3UP24 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Nlrc4Q3UP24 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nlrc4Q3UP24 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nlrc4Q3UP24 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Nlrc4Q3UP24 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nlrc4Q3UP24 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.28■□□□□ 0.68
Nlrc4Q3UP24 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nlrc4Q3UP24 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nlrc4Q3UP24 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
Nlrc4Q3UP24 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Nlrc4Q3UP24 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Nlrc4Q3UP24 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Nlrc4Q3UP24 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Nlrc4Q3UP24 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Nlrc4Q3UP24 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nlrc4Q3UP24 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nlrc4Q3UP24 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nlrc4Q3UP24 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nlrc4Q3UP24 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Nlrc4Q3UP24 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nlrc4Q3UP24 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nlrc4Q3UP24 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nlrc4Q3UP24 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nlrc4Q3UP24 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.27■□□□□ 0.68
Nlrc4Q3UP24 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.27■□□□□ 0.68
Nlrc4Q3UP24 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.27■□□□□ 0.68
Nlrc4Q3UP24 Gm20049-201ENSMUST00000219950 730 ntBASIC19.27■□□□□ 0.68
Nlrc4Q3UP24 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.27■□□□□ 0.68
Nlrc4Q3UP24 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.27■□□□□ 0.68
Nlrc4Q3UP24 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Nlrc4Q3UP24 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nlrc4Q3UP24 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nlrc4Q3UP24 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Nlrc4Q3UP24 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.26■□□□□ 0.67
Nlrc4Q3UP24 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Nlrc4Q3UP24 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Nlrc4Q3UP24 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Nlrc4Q3UP24 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.26■□□□□ 0.67
Nlrc4Q3UP24 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Nlrc4Q3UP24 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.26■□□□□ 0.67
Nlrc4Q3UP24 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.26■□□□□ 0.67
Nlrc4Q3UP24 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nlrc4Q3UP24 Gm9194-201ENSMUST00000220749 1447 ntBASIC19.25■□□□□ 0.67
Nlrc4Q3UP24 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nlrc4Q3UP24 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nlrc4Q3UP24 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nlrc4Q3UP24 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.25■□□□□ 0.67
Nlrc4Q3UP24 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Nlrc4Q3UP24 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nlrc4Q3UP24 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.25■□□□□ 0.67
Nlrc4Q3UP24 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nlrc4Q3UP24 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.25■□□□□ 0.67
Nlrc4Q3UP24 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Nlrc4Q3UP24 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nlrc4Q3UP24 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nlrc4Q3UP24 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.25■□□□□ 0.67
Nlrc4Q3UP24 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Nlrc4Q3UP24 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nlrc4Q3UP24 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nlrc4Q3UP24 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nlrc4Q3UP24 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nlrc4Q3UP24 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Nlrc4Q3UP24 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nlrc4Q3UP24 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nlrc4Q3UP24 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.24■□□□□ 0.67
Nlrc4Q3UP24 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Nlrc4Q3UP24 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Nlrc4Q3UP24 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.24■□□□□ 0.67
Nlrc4Q3UP24 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms