Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17■□□□□ 0.31
Spg11Q3UHA3 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Spg11Q3UHA3 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Spg11Q3UHA3 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Spg11Q3UHA3 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Spg11Q3UHA3 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Spg11Q3UHA3 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Spg11Q3UHA3 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Spg11Q3UHA3 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Spg11Q3UHA3 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Spg11Q3UHA3 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Spg11Q3UHA3 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Spg11Q3UHA3 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Spg11Q3UHA3 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Spg11Q3UHA3 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Spg11Q3UHA3 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Spg11Q3UHA3 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Spg11Q3UHA3 Gm11594-201ENSMUST00000122313 162 ntBASIC16.99■□□□□ 0.31
Spg11Q3UHA3 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Spg11Q3UHA3 Gm43347-201ENSMUST00000200226 580 ntBASIC16.99■□□□□ 0.31
Spg11Q3UHA3 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Spg11Q3UHA3 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Spg11Q3UHA3 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Spg11Q3UHA3 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Spg11Q3UHA3 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Spg11Q3UHA3 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Spg11Q3UHA3 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Spg11Q3UHA3 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Spg11Q3UHA3 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Spg11Q3UHA3 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Spg11Q3UHA3 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Spg11Q3UHA3 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Spg11Q3UHA3 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Spg11Q3UHA3 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Spg11Q3UHA3 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Spg11Q3UHA3 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Spg11Q3UHA3 Gm11950-201ENSMUST00000121615 838 ntBASIC16.98■□□□□ 0.31
Spg11Q3UHA3 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Spg11Q3UHA3 Mir6349-201ENSMUST00000184059 97 ntBASIC16.98■□□□□ 0.31
Spg11Q3UHA3 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Spg11Q3UHA3 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Spg11Q3UHA3 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.97■□□□□ 0.31
Spg11Q3UHA3 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Spg11Q3UHA3 Gm7791-201ENSMUST00000219066 539 ntBASIC16.97■□□□□ 0.31
Spg11Q3UHA3 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Spg11Q3UHA3 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Spg11Q3UHA3 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Spg11Q3UHA3 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Spg11Q3UHA3 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Spg11Q3UHA3 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Spg11Q3UHA3 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.97■□□□□ 0.31
Spg11Q3UHA3 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Spg11Q3UHA3 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Spg11Q3UHA3 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Spg11Q3UHA3 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Spg11Q3UHA3 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC16.97■□□□□ 0.31
Spg11Q3UHA3 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Spg11Q3UHA3 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Spg11Q3UHA3 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Spg11Q3UHA3 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Spg11Q3UHA3 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.96■□□□□ 0.31
Spg11Q3UHA3 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Spg11Q3UHA3 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Spg11Q3UHA3 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Spg11Q3UHA3 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Spg11Q3UHA3 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Spg11Q3UHA3 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Spg11Q3UHA3 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Spg11Q3UHA3 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.96■□□□□ 0.31
Spg11Q3UHA3 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Spg11Q3UHA3 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
Spg11Q3UHA3 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC16.96■□□□□ 0.3
Spg11Q3UHA3 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC16.96■□□□□ 0.3
Spg11Q3UHA3 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Spg11Q3UHA3 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Spg11Q3UHA3 Gm27389-201ENSMUST00000183622 195 ntBASIC16.95■□□□□ 0.3
Spg11Q3UHA3 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Spg11Q3UHA3 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Spg11Q3UHA3 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Spg11Q3UHA3 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Spg11Q3UHA3 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.95■□□□□ 0.3
Spg11Q3UHA3 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Spg11Q3UHA3 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC16.95■□□□□ 0.3
Spg11Q3UHA3 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Spg11Q3UHA3 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Spg11Q3UHA3 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Spg11Q3UHA3 Gm13884-201ENSMUST00000118103 829 ntBASIC16.94■□□□□ 0.3
Spg11Q3UHA3 Gm37035-201ENSMUST00000194809 2148 ntBASIC16.94■□□□□ 0.3
Spg11Q3UHA3 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.94■□□□□ 0.3
Spg11Q3UHA3 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Spg11Q3UHA3 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC16.94■□□□□ 0.3
Spg11Q3UHA3 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Spg11Q3UHA3 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Spg11Q3UHA3 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Spg11Q3UHA3 Olfr129-201ENSMUST00000122318 993 ntBASIC16.94■□□□□ 0.3
Spg11Q3UHA3 Auts2-212ENSMUST00000178555 309 ntBASIC16.94■□□□□ 0.3
Spg11Q3UHA3 Gm27742-201ENSMUST00000184667 60 ntBASIC16.94■□□□□ 0.3
Spg11Q3UHA3 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Spg11Q3UHA3 Gm7370-201ENSMUST00000219471 767 ntBASIC16.94■□□□□ 0.3
Spg11Q3UHA3 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms