Protein–RNA interactions for Protein: Q3UA16

Spc25, Kinetochore protein Spc25, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spc25Q3UA16 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Spc25Q3UA16 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Spc25Q3UA16 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
Spc25Q3UA16 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Spc25Q3UA16 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Spc25Q3UA16 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Spc25Q3UA16 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Spc25Q3UA16 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Spc25Q3UA16 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
Spc25Q3UA16 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Spc25Q3UA16 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Spc25Q3UA16 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC16.77■□□□□ 0.28
Spc25Q3UA16 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
Spc25Q3UA16 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC16.77■□□□□ 0.28
Spc25Q3UA16 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Spc25Q3UA16 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Spc25Q3UA16 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
Spc25Q3UA16 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
Spc25Q3UA16 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Spc25Q3UA16 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Spc25Q3UA16 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Spc25Q3UA16 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Spc25Q3UA16 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Spc25Q3UA16 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Spc25Q3UA16 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Spc25Q3UA16 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Spc25Q3UA16 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Spc25Q3UA16 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Spc25Q3UA16 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Spc25Q3UA16 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Spc25Q3UA16 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.76■□□□□ 0.27
Spc25Q3UA16 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Spc25Q3UA16 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Spc25Q3UA16 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC16.76■□□□□ 0.27
Spc25Q3UA16 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Spc25Q3UA16 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Spc25Q3UA16 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Spc25Q3UA16 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Spc25Q3UA16 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Spc25Q3UA16 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Spc25Q3UA16 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Spc25Q3UA16 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Spc25Q3UA16 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Spc25Q3UA16 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Spc25Q3UA16 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC16.75■□□□□ 0.27
Spc25Q3UA16 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Spc25Q3UA16 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Spc25Q3UA16 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Spc25Q3UA16 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Spc25Q3UA16 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Spc25Q3UA16 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Spc25Q3UA16 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Spc25Q3UA16 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Spc25Q3UA16 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Spc25Q3UA16 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Spc25Q3UA16 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Spc25Q3UA16 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Spc25Q3UA16 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC16.74■□□□□ 0.27
Spc25Q3UA16 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Spc25Q3UA16 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC16.74■□□□□ 0.27
Spc25Q3UA16 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Spc25Q3UA16 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC16.74■□□□□ 0.27
Spc25Q3UA16 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Spc25Q3UA16 Gm32699-201ENSMUST00000221728 1988 ntBASIC16.74■□□□□ 0.27
Spc25Q3UA16 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Spc25Q3UA16 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Spc25Q3UA16 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Spc25Q3UA16 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Spc25Q3UA16 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Spc25Q3UA16 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Spc25Q3UA16 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Spc25Q3UA16 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Spc25Q3UA16 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Spc25Q3UA16 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Spc25Q3UA16 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Spc25Q3UA16 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Spc25Q3UA16 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Spc25Q3UA16 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Spc25Q3UA16 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Spc25Q3UA16 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Spc25Q3UA16 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Spc25Q3UA16 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Spc25Q3UA16 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Spc25Q3UA16 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC16.73■□□□□ 0.27
Spc25Q3UA16 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Spc25Q3UA16 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Spc25Q3UA16 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Spc25Q3UA16 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Spc25Q3UA16 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Spc25Q3UA16 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Spc25Q3UA16 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Spc25Q3UA16 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Spc25Q3UA16 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC16.72■□□□□ 0.27
Spc25Q3UA16 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Spc25Q3UA16 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Spc25Q3UA16 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Spc25Q3UA16 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Spc25Q3UA16 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Spc25Q3UA16 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
Spc25Q3UA16 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms