Protein–RNA interactions for Protein: Q3U2C5

Rnf149, E3 ubiquitin-protein ligase RNF149, mousemouse

Predictions only

Length 394 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf149Q3U2C5 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rnf149Q3U2C5 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
Rnf149Q3U2C5 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rnf149Q3U2C5 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rnf149Q3U2C5 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rnf149Q3U2C5 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC16.44■□□□□ 0.22
Rnf149Q3U2C5 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rnf149Q3U2C5 Gm2011-201ENSMUST00000203124 1263 ntBASIC16.44■□□□□ 0.22
Rnf149Q3U2C5 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Rnf149Q3U2C5 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rnf149Q3U2C5 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rnf149Q3U2C5 AC165080.2-201ENSMUST00000217491 1530 ntBASIC16.44■□□□□ 0.22
Rnf149Q3U2C5 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
Rnf149Q3U2C5 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rnf149Q3U2C5 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Rnf149Q3U2C5 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf149Q3U2C5 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf149Q3U2C5 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf149Q3U2C5 Fst-202ENSMUST00000223640 2612 ntBASIC16.43■□□□□ 0.22
Rnf149Q3U2C5 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf149Q3U2C5 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf149Q3U2C5 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf149Q3U2C5 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf149Q3U2C5 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf149Q3U2C5 Gm11421-201ENSMUST00000122124 294 ntBASIC16.43■□□□□ 0.22
Rnf149Q3U2C5 Cdc34b-202ENSMUST00000188741 1252 ntBASIC16.43■□□□□ 0.22
Rnf149Q3U2C5 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf149Q3U2C5 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Rnf149Q3U2C5 Gm40848-201ENSMUST00000221998 324 ntBASIC16.43■□□□□ 0.22
Rnf149Q3U2C5 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf149Q3U2C5 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf149Q3U2C5 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.43■□□□□ 0.22
Rnf149Q3U2C5 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf149Q3U2C5 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf149Q3U2C5 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Rnf149Q3U2C5 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Rnf149Q3U2C5 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Rnf149Q3U2C5 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf149Q3U2C5 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf149Q3U2C5 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf149Q3U2C5 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf149Q3U2C5 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf149Q3U2C5 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf149Q3U2C5 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf149Q3U2C5 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf149Q3U2C5 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf149Q3U2C5 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf149Q3U2C5 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
Rnf149Q3U2C5 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Rnf149Q3U2C5 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf149Q3U2C5 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf149Q3U2C5 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf149Q3U2C5 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.42■□□□□ 0.22
Rnf149Q3U2C5 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf149Q3U2C5 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Rnf149Q3U2C5 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf149Q3U2C5 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf149Q3U2C5 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf149Q3U2C5 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf149Q3U2C5 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Rnf149Q3U2C5 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Rnf149Q3U2C5 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf149Q3U2C5 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC16.41■□□□□ 0.22
Rnf149Q3U2C5 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf149Q3U2C5 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf149Q3U2C5 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf149Q3U2C5 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf149Q3U2C5 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Rnf149Q3U2C5 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf149Q3U2C5 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf149Q3U2C5 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
Rnf149Q3U2C5 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf149Q3U2C5 Gm43060-201ENSMUST00000200621 289 ntBASIC16.41■□□□□ 0.22
Rnf149Q3U2C5 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf149Q3U2C5 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf149Q3U2C5 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf149Q3U2C5 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf149Q3U2C5 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf149Q3U2C5 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf149Q3U2C5 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Rnf149Q3U2C5 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf149Q3U2C5 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf149Q3U2C5 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC16.4■□□□□ 0.22
Rnf149Q3U2C5 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf149Q3U2C5 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf149Q3U2C5 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.4■□□□□ 0.22
Rnf149Q3U2C5 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf149Q3U2C5 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf149Q3U2C5 AC137127.1-201ENSMUST00000213466 1078 ntBASIC16.4■□□□□ 0.22
Rnf149Q3U2C5 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Rnf149Q3U2C5 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf149Q3U2C5 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf149Q3U2C5 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf149Q3U2C5 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf149Q3U2C5 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf149Q3U2C5 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf149Q3U2C5 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rnf149Q3U2C5 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Rnf149Q3U2C5 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Rnf149Q3U2C5 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms