Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.27■□□□□ 0.68
Cul4aQ3TCH7 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cul4aQ3TCH7 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cul4aQ3TCH7 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Cul4aQ3TCH7 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cul4aQ3TCH7 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cul4aQ3TCH7 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cul4aQ3TCH7 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cul4aQ3TCH7 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.27■□□□□ 0.67
Cul4aQ3TCH7 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cul4aQ3TCH7 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cul4aQ3TCH7 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cul4aQ3TCH7 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.26■□□□□ 0.67
Cul4aQ3TCH7 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cul4aQ3TCH7 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cul4aQ3TCH7 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cul4aQ3TCH7 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cul4aQ3TCH7 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cul4aQ3TCH7 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Cul4aQ3TCH7 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cul4aQ3TCH7 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Cul4aQ3TCH7 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cul4aQ3TCH7 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cul4aQ3TCH7 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
Cul4aQ3TCH7 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Cul4aQ3TCH7 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.25■□□□□ 0.67
Cul4aQ3TCH7 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cul4aQ3TCH7 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cul4aQ3TCH7 Gm43702-201ENSMUST00000198772 2546 ntBASIC19.24■□□□□ 0.67
Cul4aQ3TCH7 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cul4aQ3TCH7 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cul4aQ3TCH7 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cul4aQ3TCH7 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cul4aQ3TCH7 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
Cul4aQ3TCH7 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cul4aQ3TCH7 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Cul4aQ3TCH7 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Cul4aQ3TCH7 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cul4aQ3TCH7 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC19.24■□□□□ 0.67
Cul4aQ3TCH7 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cul4aQ3TCH7 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.24■□□□□ 0.67
Cul4aQ3TCH7 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Cul4aQ3TCH7 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cul4aQ3TCH7 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cul4aQ3TCH7 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cul4aQ3TCH7 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cul4aQ3TCH7 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cul4aQ3TCH7 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Cul4aQ3TCH7 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cul4aQ3TCH7 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cul4aQ3TCH7 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
Cul4aQ3TCH7 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.23■□□□□ 0.67
Cul4aQ3TCH7 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.23■□□□□ 0.67
Cul4aQ3TCH7 Gm9988-201ENSMUST00000069786 435 ntBASIC19.23■□□□□ 0.67
Cul4aQ3TCH7 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Cul4aQ3TCH7 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cul4aQ3TCH7 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Cul4aQ3TCH7 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cul4aQ3TCH7 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cul4aQ3TCH7 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cul4aQ3TCH7 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cul4aQ3TCH7 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cul4aQ3TCH7 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cul4aQ3TCH7 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Cul4aQ3TCH7 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Cul4aQ3TCH7 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cul4aQ3TCH7 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.22■□□□□ 0.67
Cul4aQ3TCH7 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cul4aQ3TCH7 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cul4aQ3TCH7 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cul4aQ3TCH7 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cul4aQ3TCH7 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cul4aQ3TCH7 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Cul4aQ3TCH7 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cul4aQ3TCH7 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Cul4aQ3TCH7 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cul4aQ3TCH7 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cul4aQ3TCH7 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cul4aQ3TCH7 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cul4aQ3TCH7 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cul4aQ3TCH7 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cul4aQ3TCH7 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cul4aQ3TCH7 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC19.2■□□□□ 0.66
Cul4aQ3TCH7 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cul4aQ3TCH7 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cul4aQ3TCH7 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.2■□□□□ 0.66
Cul4aQ3TCH7 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.2■□□□□ 0.66
Cul4aQ3TCH7 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cul4aQ3TCH7 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cul4aQ3TCH7 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cul4aQ3TCH7 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Cul4aQ3TCH7 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cul4aQ3TCH7 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
Cul4aQ3TCH7 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
Cul4aQ3TCH7 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cul4aQ3TCH7 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.2■□□□□ 0.66
Cul4aQ3TCH7 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cul4aQ3TCH7 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cul4aQ3TCH7 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cul4aQ3TCH7 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 10.4 ms