Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC9.91□□□□□ -0.82
Ush2AQ2QI47 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ush2AQ2QI47 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Ush2AQ2QI47 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ush2AQ2QI47 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ush2AQ2QI47 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ush2AQ2QI47 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ush2AQ2QI47 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Ush2AQ2QI47 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Ush2AQ2QI47 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC9.91□□□□□ -0.82
Ush2AQ2QI47 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC9.91□□□□□ -0.82
Ush2AQ2QI47 AC161829.1-201ENSMUST00000220298 281 ntBASIC9.91□□□□□ -0.82
Ush2AQ2QI47 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ush2AQ2QI47 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ush2AQ2QI47 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Ush2AQ2QI47 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Ush2AQ2QI47 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC9.9□□□□□ -0.82
Ush2AQ2QI47 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ush2AQ2QI47 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ush2AQ2QI47 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ush2AQ2QI47 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ush2AQ2QI47 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ush2AQ2QI47 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC9.9□□□□□ -0.82
Ush2AQ2QI47 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ush2AQ2QI47 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC9.9□□□□□ -0.82
Ush2AQ2QI47 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ush2AQ2QI47 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ush2AQ2QI47 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ush2AQ2QI47 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC9.9□□□□□ -0.82
Ush2AQ2QI47 Mir5131-201ENSMUST00000175426 93 ntBASIC9.9□□□□□ -0.82
Ush2AQ2QI47 Gm2756-201ENSMUST00000195851 400 ntBASIC9.9□□□□□ -0.82
Ush2AQ2QI47 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ush2AQ2QI47 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Ush2AQ2QI47 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Ush2AQ2QI47 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ush2AQ2QI47 Gm11779-201ENSMUST00000118541 368 ntBASIC9.9□□□□□ -0.82
Ush2AQ2QI47 Gm13474-201ENSMUST00000122466 815 ntBASIC9.9□□□□□ -0.82
Ush2AQ2QI47 Gm3272-201ENSMUST00000181181 1229 ntBASIC9.9□□□□□ -0.82
Ush2AQ2QI47 Mir1668-201ENSMUST00000184114 107 ntBASIC9.9□□□□□ -0.82
Ush2AQ2QI47 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC9.9□□□□□ -0.82
Ush2AQ2QI47 Gm10566-201ENSMUST00000086739 996 ntBASIC9.9□□□□□ -0.82
Ush2AQ2QI47 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Ush2AQ2QI47 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC9.9□□□□□ -0.82
Ush2AQ2QI47 Gm15165-201ENSMUST00000118140 502 ntBASIC9.9□□□□□ -0.83
Ush2AQ2QI47 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC9.9□□□□□ -0.83
Ush2AQ2QI47 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC9.9□□□□□ -0.83
Ush2AQ2QI47 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Ush2AQ2QI47 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Ush2AQ2QI47 Gm16061-201ENSMUST00000122167 857 ntBASIC9.89□□□□□ -0.83
Ush2AQ2QI47 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Ush2AQ2QI47 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC9.89□□□□□ -0.83
Ush2AQ2QI47 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC9.89□□□□□ -0.83
Ush2AQ2QI47 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ush2AQ2QI47 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Ush2AQ2QI47 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ush2AQ2QI47 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Ush2AQ2QI47 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Ush2AQ2QI47 Gm5364-201ENSMUST00000216789 889 ntBASIC9.89□□□□□ -0.83
Ush2AQ2QI47 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ush2AQ2QI47 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC9.89□□□□□ -0.83
Ush2AQ2QI47 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC9.89□□□□□ -0.83
Ush2AQ2QI47 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Ush2AQ2QI47 Gm19094-201ENSMUST00000209791 1246 ntBASIC9.89□□□□□ -0.83
Ush2AQ2QI47 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ush2AQ2QI47 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC9.89□□□□□ -0.83
Ush2AQ2QI47 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Ush2AQ2QI47 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC9.88□□□□□ -0.83
Ush2AQ2QI47 Mir6349-201ENSMUST00000184059 97 ntBASIC9.88□□□□□ -0.83
Ush2AQ2QI47 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ush2AQ2QI47 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ush2AQ2QI47 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ush2AQ2QI47 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ush2AQ2QI47 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC9.88□□□□□ -0.83
Ush2AQ2QI47 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Ush2AQ2QI47 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ush2AQ2QI47 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Ush2AQ2QI47 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Ush2AQ2QI47 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ush2AQ2QI47 Zfp783-201ENSMUST00000095946 670 ntBASIC9.88□□□□□ -0.83
Ush2AQ2QI47 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ush2AQ2QI47 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ush2AQ2QI47 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ush2AQ2QI47 Mir5126-201ENSMUST00000175513 77 ntBASIC9.88□□□□□ -0.83
Ush2AQ2QI47 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Ush2AQ2QI47 Spsb2-203ENSMUST00000112473 1322 ntBASIC9.88□□□□□ -0.83
Ush2AQ2QI47 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ush2AQ2QI47 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Ush2AQ2QI47 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ush2AQ2QI47 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ush2AQ2QI47 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC9.87□□□□□ -0.83
Ush2AQ2QI47 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC9.87□□□□□ -0.83
Ush2AQ2QI47 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Ush2AQ2QI47 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
Ush2AQ2QI47 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ush2AQ2QI47 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Ush2AQ2QI47 Gm14822-201ENSMUST00000122247 291 ntBASIC9.87□□□□□ -0.83
Ush2AQ2QI47 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Ush2AQ2QI47 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC9.87□□□□□ -0.83
Ush2AQ2QI47 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ush2AQ2QI47 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms