Protein–RNA interactions for Protein: Q2EG98

Pkd1l3, Polycystic kidney disease protein 1-like 3, mousemouse

Predictions only

Length 2,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1l3Q2EG98 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pkd1l3Q2EG98 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pkd1l3Q2EG98 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pkd1l3Q2EG98 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pkd1l3Q2EG98 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pkd1l3Q2EG98 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pkd1l3Q2EG98 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pkd1l3Q2EG98 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pkd1l3Q2EG98 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pkd1l3Q2EG98 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.44■□□□□ 0.22
Pkd1l3Q2EG98 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pkd1l3Q2EG98 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Pkd1l3Q2EG98 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pkd1l3Q2EG98 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pkd1l3Q2EG98 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pkd1l3Q2EG98 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Pkd1l3Q2EG98 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pkd1l3Q2EG98 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pkd1l3Q2EG98 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pkd1l3Q2EG98 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
Pkd1l3Q2EG98 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pkd1l3Q2EG98 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Pkd1l3Q2EG98 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pkd1l3Q2EG98 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pkd1l3Q2EG98 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Pkd1l3Q2EG98 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pkd1l3Q2EG98 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pkd1l3Q2EG98 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pkd1l3Q2EG98 Mir1199-201ENSMUST00000117015 119 ntBASIC16.43■□□□□ 0.22
Pkd1l3Q2EG98 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pkd1l3Q2EG98 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pkd1l3Q2EG98 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pkd1l3Q2EG98 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC16.43■□□□□ 0.22
Pkd1l3Q2EG98 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC16.43■□□□□ 0.22
Pkd1l3Q2EG98 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pkd1l3Q2EG98 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pkd1l3Q2EG98 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC16.43■□□□□ 0.22
Pkd1l3Q2EG98 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Pkd1l3Q2EG98 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pkd1l3Q2EG98 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pkd1l3Q2EG98 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pkd1l3Q2EG98 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pkd1l3Q2EG98 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pkd1l3Q2EG98 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pkd1l3Q2EG98 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pkd1l3Q2EG98 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Pkd1l3Q2EG98 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
Pkd1l3Q2EG98 Gm6576-201ENSMUST00000169678 883 ntBASIC16.42■□□□□ 0.22
Pkd1l3Q2EG98 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pkd1l3Q2EG98 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Pkd1l3Q2EG98 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pkd1l3Q2EG98 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pkd1l3Q2EG98 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.41■□□□□ 0.22
Pkd1l3Q2EG98 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pkd1l3Q2EG98 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pkd1l3Q2EG98 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Pkd1l3Q2EG98 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.41■□□□□ 0.22
Pkd1l3Q2EG98 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pkd1l3Q2EG98 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pkd1l3Q2EG98 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pkd1l3Q2EG98 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
Pkd1l3Q2EG98 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pkd1l3Q2EG98 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.41■□□□□ 0.22
Pkd1l3Q2EG98 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pkd1l3Q2EG98 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pkd1l3Q2EG98 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.41■□□□□ 0.22
Pkd1l3Q2EG98 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pkd1l3Q2EG98 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Pkd1l3Q2EG98 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
Pkd1l3Q2EG98 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pkd1l3Q2EG98 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pkd1l3Q2EG98 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.4■□□□□ 0.22
Pkd1l3Q2EG98 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pkd1l3Q2EG98 Zfp783-201ENSMUST00000095946 670 ntBASIC16.4■□□□□ 0.22
Pkd1l3Q2EG98 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pkd1l3Q2EG98 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pkd1l3Q2EG98 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pkd1l3Q2EG98 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pkd1l3Q2EG98 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pkd1l3Q2EG98 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pkd1l3Q2EG98 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC16.4■□□□□ 0.22
Pkd1l3Q2EG98 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pkd1l3Q2EG98 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pkd1l3Q2EG98 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
Pkd1l3Q2EG98 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
Pkd1l3Q2EG98 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.39■□□□□ 0.22
Pkd1l3Q2EG98 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pkd1l3Q2EG98 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pkd1l3Q2EG98 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC16.39■□□□□ 0.21
Pkd1l3Q2EG98 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pkd1l3Q2EG98 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pkd1l3Q2EG98 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pkd1l3Q2EG98 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pkd1l3Q2EG98 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.39■□□□□ 0.21
Pkd1l3Q2EG98 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pkd1l3Q2EG98 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.39■□□□□ 0.21
Pkd1l3Q2EG98 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.39■□□□□ 0.21
Pkd1l3Q2EG98 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.39■□□□□ 0.21
Pkd1l3Q2EG98 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pkd1l3Q2EG98 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms