Protein–RNA interactions for Protein: P97929

Brca2, Breast cancer type 2 susceptibility protein homolog, mousemouse

Predictions only

Length 3,329 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca2P97929 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Brca2P97929 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Brca2P97929 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC17.81■□□□□ 0.44
Brca2P97929 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Brca2P97929 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.81■□□□□ 0.44
Brca2P97929 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Brca2P97929 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.8■□□□□ 0.44
Brca2P97929 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Brca2P97929 Gm18025-201ENSMUST00000221733 862 ntBASIC17.8■□□□□ 0.44
Brca2P97929 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Brca2P97929 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Brca2P97929 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Brca2P97929 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Brca2P97929 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.8■□□□□ 0.44
Brca2P97929 Gm43183-201ENSMUST00000200632 547 ntBASIC17.8■□□□□ 0.44
Brca2P97929 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
Brca2P97929 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Brca2P97929 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Brca2P97929 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.8■□□□□ 0.44
Brca2P97929 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Brca2P97929 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Brca2P97929 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Brca2P97929 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Brca2P97929 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Brca2P97929 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.79■□□□□ 0.44
Brca2P97929 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Brca2P97929 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Brca2P97929 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.79■□□□□ 0.44
Brca2P97929 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Brca2P97929 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Brca2P97929 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Brca2P97929 Golph3-202ENSMUST00000226517 2359 ntBASIC17.79■□□□□ 0.44
Brca2P97929 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Brca2P97929 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.79■□□□□ 0.44
Brca2P97929 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.79■□□□□ 0.44
Brca2P97929 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Brca2P97929 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Brca2P97929 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.78■□□□□ 0.44
Brca2P97929 Gm17661-201ENSMUST00000170317 270 ntBASIC17.78■□□□□ 0.44
Brca2P97929 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.78■□□□□ 0.44
Brca2P97929 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Brca2P97929 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Brca2P97929 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Brca2P97929 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Brca2P97929 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Brca2P97929 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.77■□□□□ 0.44
Brca2P97929 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Brca2P97929 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Brca2P97929 Gm7063-201ENSMUST00000186840 981 ntBASIC17.77■□□□□ 0.44
Brca2P97929 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Brca2P97929 Gm11927-201ENSMUST00000118472 759 ntBASIC17.77■□□□□ 0.43
Brca2P97929 Gm45058-201ENSMUST00000205810 766 ntBASIC17.77■□□□□ 0.43
Brca2P97929 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Brca2P97929 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.77■□□□□ 0.43
Brca2P97929 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Brca2P97929 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Brca2P97929 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Brca2P97929 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Brca2P97929 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.76■□□□□ 0.43
Brca2P97929 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Brca2P97929 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Brca2P97929 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.76■□□□□ 0.43
Brca2P97929 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Brca2P97929 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Brca2P97929 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.76■□□□□ 0.43
Brca2P97929 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Brca2P97929 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Brca2P97929 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Brca2P97929 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Brca2P97929 Gm15375-201ENSMUST00000119510 849 ntBASIC17.75■□□□□ 0.43
Brca2P97929 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.75■□□□□ 0.43
Brca2P97929 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.75■□□□□ 0.43
Brca2P97929 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Brca2P97929 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Brca2P97929 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Brca2P97929 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Brca2P97929 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Brca2P97929 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Brca2P97929 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Brca2P97929 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC17.75■□□□□ 0.43
Brca2P97929 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Brca2P97929 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Brca2P97929 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Brca2P97929 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
Brca2P97929 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Brca2P97929 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.74■□□□□ 0.43
Brca2P97929 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Brca2P97929 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Brca2P97929 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Brca2P97929 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Brca2P97929 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Brca2P97929 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Brca2P97929 Gm37292-201ENSMUST00000192062 758 ntBASIC17.74■□□□□ 0.43
Brca2P97929 AC154621.1-201ENSMUST00000226155 1119 ntBASIC17.74■□□□□ 0.43
Brca2P97929 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.73■□□□□ 0.43
Brca2P97929 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Brca2P97929 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Brca2P97929 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.73■□□□□ 0.43
Brca2P97929 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Brca2P97929 Gm22697-201ENSMUST00000175194 63 ntBASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms