Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.96■□□□□ 0.79
Trim43cP86449 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Trim43cP86449 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim43cP86449 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim43cP86449 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim43cP86449 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
Trim43cP86449 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Trim43cP86449 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Trim43cP86449 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim43cP86449 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.96■□□□□ 0.79
Trim43cP86449 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
Trim43cP86449 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Trim43cP86449 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim43cP86449 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.95■□□□□ 0.78
Trim43cP86449 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trim43cP86449 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.95■□□□□ 0.78
Trim43cP86449 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim43cP86449 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.95■□□□□ 0.78
Trim43cP86449 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.95■□□□□ 0.78
Trim43cP86449 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim43cP86449 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.95■□□□□ 0.78
Trim43cP86449 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trim43cP86449 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim43cP86449 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim43cP86449 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim43cP86449 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim43cP86449 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim43cP86449 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim43cP86449 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim43cP86449 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim43cP86449 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
Trim43cP86449 Gm12933-201ENSMUST00000120203 872 ntBASIC19.94■□□□□ 0.78
Trim43cP86449 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.94■□□□□ 0.78
Trim43cP86449 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.94■□□□□ 0.78
Trim43cP86449 Gm26524-201ENSMUST00000192339 390 ntBASIC19.94■□□□□ 0.78
Trim43cP86449 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim43cP86449 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim43cP86449 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
Trim43cP86449 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trim43cP86449 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim43cP86449 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trim43cP86449 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim43cP86449 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim43cP86449 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.93■□□□□ 0.78
Trim43cP86449 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Trim43cP86449 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.93■□□□□ 0.78
Trim43cP86449 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim43cP86449 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trim43cP86449 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim43cP86449 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim43cP86449 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim43cP86449 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim43cP86449 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Trim43cP86449 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trim43cP86449 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.92■□□□□ 0.78
Trim43cP86449 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.92■□□□□ 0.78
Trim43cP86449 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim43cP86449 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim43cP86449 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim43cP86449 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim43cP86449 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Trim43cP86449 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim43cP86449 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.92■□□□□ 0.78
Trim43cP86449 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trim43cP86449 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Trim43cP86449 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim43cP86449 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim43cP86449 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.91■□□□□ 0.78
Trim43cP86449 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Trim43cP86449 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.91■□□□□ 0.78
Trim43cP86449 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim43cP86449 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim43cP86449 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim43cP86449 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Trim43cP86449 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim43cP86449 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Trim43cP86449 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim43cP86449 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trim43cP86449 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim43cP86449 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim43cP86449 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Trim43cP86449 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim43cP86449 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Trim43cP86449 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim43cP86449 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Trim43cP86449 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim43cP86449 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim43cP86449 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim43cP86449 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.9■□□□□ 0.78
Trim43cP86449 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim43cP86449 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim43cP86449 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trim43cP86449 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim43cP86449 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Trim43cP86449 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim43cP86449 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.89■□□□□ 0.77
Trim43cP86449 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim43cP86449 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.89■□□□□ 0.77
Trim43cP86449 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim43cP86449 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms