Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC16.35■□□□□ 0.21
SgcbP82349 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SgcbP82349 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC16.35■□□□□ 0.21
SgcbP82349 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SgcbP82349 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
SgcbP82349 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
SgcbP82349 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SgcbP82349 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SgcbP82349 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SgcbP82349 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
SgcbP82349 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SgcbP82349 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
SgcbP82349 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SgcbP82349 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SgcbP82349 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SgcbP82349 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SgcbP82349 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
SgcbP82349 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SgcbP82349 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC16.33■□□□□ 0.21
SgcbP82349 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
SgcbP82349 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
SgcbP82349 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
SgcbP82349 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SgcbP82349 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SgcbP82349 Gm12441-201ENSMUST00000121806 588 ntBASIC16.33■□□□□ 0.2
SgcbP82349 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.33■□□□□ 0.2
SgcbP82349 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SgcbP82349 CT025689.6-201ENSMUST00000224991 1104 ntBASIC16.33■□□□□ 0.2
SgcbP82349 Spcs1-207ENSMUST00000228767 1008 ntBASIC16.33■□□□□ 0.2
SgcbP82349 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SgcbP82349 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SgcbP82349 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SgcbP82349 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
SgcbP82349 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC16.33■□□□□ 0.2
SgcbP82349 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
SgcbP82349 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SgcbP82349 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SgcbP82349 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SgcbP82349 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SgcbP82349 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SgcbP82349 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
SgcbP82349 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SgcbP82349 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SgcbP82349 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SgcbP82349 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SgcbP82349 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SgcbP82349 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SgcbP82349 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
SgcbP82349 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SgcbP82349 Gm43672-201ENSMUST00000199072 1731 ntBASIC16.32■□□□□ 0.2
SgcbP82349 Gm44672-201ENSMUST00000206944 1098 ntBASIC16.32■□□□□ 0.2
SgcbP82349 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC16.32■□□□□ 0.2
SgcbP82349 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SgcbP82349 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SgcbP82349 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SgcbP82349 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SgcbP82349 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SgcbP82349 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SgcbP82349 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SgcbP82349 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SgcbP82349 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SgcbP82349 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SgcbP82349 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
SgcbP82349 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SgcbP82349 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SgcbP82349 Gm43859-201ENSMUST00000200075 1412 ntBASIC16.31■□□□□ 0.2
SgcbP82349 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.31■□□□□ 0.2
SgcbP82349 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SgcbP82349 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC16.31■□□□□ 0.2
SgcbP82349 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
SgcbP82349 Rab3c-203ENSMUST00000224180 967 ntBASIC16.31■□□□□ 0.2
SgcbP82349 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SgcbP82349 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC16.31■□□□□ 0.2
SgcbP82349 Gm4968-201ENSMUST00000071458 858 ntBASIC16.31■□□□□ 0.2
SgcbP82349 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC16.31■□□□□ 0.2
SgcbP82349 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SgcbP82349 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SgcbP82349 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SgcbP82349 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SgcbP82349 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SgcbP82349 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SgcbP82349 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
SgcbP82349 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SgcbP82349 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.3■□□□□ 0.2
SgcbP82349 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16.3■□□□□ 0.2
SgcbP82349 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC16.3■□□□□ 0.2
SgcbP82349 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC16.3■□□□□ 0.2
SgcbP82349 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SgcbP82349 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SgcbP82349 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SgcbP82349 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SgcbP82349 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC16.3■□□□□ 0.2
SgcbP82349 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SgcbP82349 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SgcbP82349 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SgcbP82349 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SgcbP82349 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SgcbP82349 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SgcbP82349 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SgcbP82349 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms