Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ldb1P70662 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.24■□□□□ 0.51
Ldb1P70662 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ldb1P70662 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ldb1P70662 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ldb1P70662 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ldb1P70662 Fst-202ENSMUST00000223640 2612 ntBASIC18.23■□□□□ 0.51
Ldb1P70662 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ldb1P70662 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.23■□□□□ 0.51
Ldb1P70662 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.23■□□□□ 0.51
Ldb1P70662 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.23■□□□□ 0.51
Ldb1P70662 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.23■□□□□ 0.51
Ldb1P70662 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.23■□□□□ 0.51
Ldb1P70662 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Ldb1P70662 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ldb1P70662 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ldb1P70662 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ldb1P70662 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ldb1P70662 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ldb1P70662 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ldb1P70662 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.23■□□□□ 0.51
Ldb1P70662 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ldb1P70662 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Ldb1P70662 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Ldb1P70662 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ldb1P70662 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Ldb1P70662 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ldb1P70662 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ldb1P70662 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.22■□□□□ 0.51
Ldb1P70662 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ldb1P70662 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ldb1P70662 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ldb1P70662 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ldb1P70662 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ldb1P70662 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ldb1P70662 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ldb1P70662 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.22■□□□□ 0.51
Ldb1P70662 Grk6-206ENSMUST00000224995 2971 ntBASIC18.21■□□□□ 0.51
Ldb1P70662 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ldb1P70662 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ldb1P70662 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ldb1P70662 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.21■□□□□ 0.51
Ldb1P70662 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Ldb1P70662 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ldb1P70662 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ldb1P70662 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ldb1P70662 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Ldb1P70662 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.2■□□□□ 0.5
Ldb1P70662 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.2■□□□□ 0.5
Ldb1P70662 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Ldb1P70662 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ldb1P70662 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ldb1P70662 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.2■□□□□ 0.5
Ldb1P70662 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.2■□□□□ 0.5
Ldb1P70662 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.2■□□□□ 0.5
Ldb1P70662 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ldb1P70662 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ldb1P70662 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ldb1P70662 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ldb1P70662 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ldb1P70662 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.2■□□□□ 0.5
Ldb1P70662 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ldb1P70662 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
Ldb1P70662 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ldb1P70662 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.19■□□□□ 0.5
Ldb1P70662 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ldb1P70662 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.19■□□□□ 0.5
Ldb1P70662 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Ldb1P70662 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.19■□□□□ 0.5
Ldb1P70662 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
Ldb1P70662 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ldb1P70662 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.19■□□□□ 0.5
Ldb1P70662 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ldb1P70662 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Ldb1P70662 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ldb1P70662 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ldb1P70662 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.19■□□□□ 0.5
Ldb1P70662 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ldb1P70662 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.19■□□□□ 0.5
Ldb1P70662 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ldb1P70662 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ldb1P70662 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Ldb1P70662 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ldb1P70662 Rarb-207ENSMUST00000225921 2756 ntBASIC18.18■□□□□ 0.5
Ldb1P70662 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ldb1P70662 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Ldb1P70662 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.18■□□□□ 0.5
Ldb1P70662 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ldb1P70662 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ldb1P70662 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ldb1P70662 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.18■□□□□ 0.5
Ldb1P70662 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ldb1P70662 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
Ldb1P70662 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ldb1P70662 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ldb1P70662 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.18■□□□□ 0.5
Ldb1P70662 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.17■□□□□ 0.5
Ldb1P70662 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ldb1P70662 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.17■□□□□ 0.5
Ldb1P70662 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms