Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.51■□□□□ 0.55
ThraP63058 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ThraP63058 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ThraP63058 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
ThraP63058 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ThraP63058 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ThraP63058 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
ThraP63058 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
ThraP63058 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ThraP63058 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ThraP63058 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ThraP63058 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ThraP63058 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ThraP63058 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ThraP63058 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ThraP63058 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.5■□□□□ 0.55
ThraP63058 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ThraP63058 Gm10653-202ENSMUST00000139570 835 ntBASIC18.5■□□□□ 0.55
ThraP63058 Nespas-201ENSMUST00000143738 1083 ntBASIC18.5■□□□□ 0.55
ThraP63058 Gm6365-201ENSMUST00000054711 744 ntBASIC18.5■□□□□ 0.55
ThraP63058 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ThraP63058 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
ThraP63058 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ThraP63058 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
ThraP63058 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ThraP63058 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ThraP63058 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ThraP63058 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ThraP63058 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ThraP63058 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ThraP63058 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.49■□□□□ 0.55
ThraP63058 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ThraP63058 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC18.49■□□□□ 0.55
ThraP63058 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.49■□□□□ 0.55
ThraP63058 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ThraP63058 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.49■□□□□ 0.55
ThraP63058 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
ThraP63058 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ThraP63058 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ThraP63058 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
ThraP63058 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ThraP63058 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ThraP63058 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ThraP63058 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.49■□□□□ 0.55
ThraP63058 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.49■□□□□ 0.55
ThraP63058 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ThraP63058 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ThraP63058 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ThraP63058 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ThraP63058 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ThraP63058 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ThraP63058 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
ThraP63058 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.49■□□□□ 0.55
ThraP63058 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ThraP63058 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ThraP63058 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
ThraP63058 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ThraP63058 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ThraP63058 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
ThraP63058 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ThraP63058 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ThraP63058 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ThraP63058 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
ThraP63058 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.48■□□□□ 0.55
ThraP63058 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ThraP63058 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
ThraP63058 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
ThraP63058 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ThraP63058 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.47■□□□□ 0.55
ThraP63058 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ThraP63058 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ThraP63058 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ThraP63058 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ThraP63058 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ThraP63058 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ThraP63058 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
ThraP63058 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.47■□□□□ 0.55
ThraP63058 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ThraP63058 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
ThraP63058 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ThraP63058 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ThraP63058 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ThraP63058 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.47■□□□□ 0.55
ThraP63058 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ThraP63058 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ThraP63058 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
ThraP63058 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
ThraP63058 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ThraP63058 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
ThraP63058 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ThraP63058 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
ThraP63058 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
ThraP63058 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
ThraP63058 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
ThraP63058 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.46■□□□□ 0.55
ThraP63058 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ThraP63058 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ThraP63058 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ThraP63058 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ThraP63058 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms