Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC13.08□□□□□ -0.32
Rpl39P62892 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC13.08□□□□□ -0.32
Rpl39P62892 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rpl39P62892 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rpl39P62892 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rpl39P62892 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rpl39P62892 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
Rpl39P62892 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rpl39P62892 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rpl39P62892 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC13.07□□□□□ -0.32
Rpl39P62892 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC13.07□□□□□ -0.32
Rpl39P62892 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rpl39P62892 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Rpl39P62892 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Rpl39P62892 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rpl39P62892 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rpl39P62892 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rpl39P62892 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rpl39P62892 Zcchc6-207ENSMUST00000225576 2499 ntBASIC13.06□□□□□ -0.32
Rpl39P62892 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rpl39P62892 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Rpl39P62892 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rpl39P62892 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Rpl39P62892 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Rpl39P62892 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rpl39P62892 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rpl39P62892 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC13.06□□□□□ -0.32
Rpl39P62892 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rpl39P62892 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rpl39P62892 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC13.06□□□□□ -0.32
Rpl39P62892 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rpl39P62892 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rpl39P62892 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rpl39P62892 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rpl39P62892 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rpl39P62892 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rpl39P62892 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rpl39P62892 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC13.06□□□□□ -0.32
Rpl39P62892 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rpl39P62892 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rpl39P62892 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rpl39P62892 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rpl39P62892 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rpl39P62892 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rpl39P62892 Gm45906-201ENSMUST00000208911 1430 ntBASIC13.05□□□□□ -0.32
Rpl39P62892 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rpl39P62892 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rpl39P62892 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rpl39P62892 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC13.05□□□□□ -0.32
Rpl39P62892 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC13.05□□□□□ -0.32
Rpl39P62892 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rpl39P62892 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Rpl39P62892 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rpl39P62892 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC13.05□□□□□ -0.32
Rpl39P62892 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rpl39P62892 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rpl39P62892 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rpl39P62892 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rpl39P62892 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
Rpl39P62892 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rpl39P62892 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rpl39P62892 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Rpl39P62892 Fcho2-208ENSMUST00000224992 2964 ntBASIC13.05□□□□□ -0.32
Rpl39P62892 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rpl39P62892 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rpl39P62892 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rpl39P62892 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC13.05□□□□□ -0.32
Rpl39P62892 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rpl39P62892 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rpl39P62892 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rpl39P62892 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rpl39P62892 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rpl39P62892 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC13.04□□□□□ -0.32
Rpl39P62892 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rpl39P62892 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC13.04□□□□□ -0.32
Rpl39P62892 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rpl39P62892 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rpl39P62892 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC13.04□□□□□ -0.32
Rpl39P62892 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC13.04□□□□□ -0.32
Rpl39P62892 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC13.04□□□□□ -0.32
Rpl39P62892 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rpl39P62892 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC13.04□□□□□ -0.32
Rpl39P62892 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rpl39P62892 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Rpl39P62892 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rpl39P62892 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rpl39P62892 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Rpl39P62892 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rpl39P62892 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Rpl39P62892 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rpl39P62892 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Rpl39P62892 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rpl39P62892 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rpl39P62892 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Rpl39P62892 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rpl39P62892 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rpl39P62892 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rpl39P62892 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rpl39P62892 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC13.03□□□□□ -0.32
Rpl39P62892 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms