Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sec61a1P61620 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Sec61a1P61620 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Sec61a1P61620 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sec61a1P61620 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sec61a1P61620 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Sec61a1P61620 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sec61a1P61620 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sec61a1P61620 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sec61a1P61620 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sec61a1P61620 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sec61a1P61620 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC16.11■□□□□ 0.17
Sec61a1P61620 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Sec61a1P61620 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sec61a1P61620 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC16.11■□□□□ 0.17
Sec61a1P61620 Gm26571-201ENSMUST00000181399 666 ntBASIC16.11■□□□□ 0.17
Sec61a1P61620 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sec61a1P61620 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sec61a1P61620 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sec61a1P61620 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Sec61a1P61620 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sec61a1P61620 Gm10571-201ENSMUST00000097869 1638 ntBASIC16.11■□□□□ 0.17
Sec61a1P61620 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Sec61a1P61620 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Sec61a1P61620 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sec61a1P61620 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sec61a1P61620 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sec61a1P61620 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sec61a1P61620 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Sec61a1P61620 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sec61a1P61620 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sec61a1P61620 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sec61a1P61620 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sec61a1P61620 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sec61a1P61620 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC16.1■□□□□ 0.17
Sec61a1P61620 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Sec61a1P61620 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sec61a1P61620 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sec61a1P61620 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sec61a1P61620 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Sec61a1P61620 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Sec61a1P61620 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Sec61a1P61620 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Sec61a1P61620 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sec61a1P61620 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sec61a1P61620 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sec61a1P61620 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Sec61a1P61620 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sec61a1P61620 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Sec61a1P61620 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sec61a1P61620 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
Sec61a1P61620 AC154266.1-201ENSMUST00000223190 503 ntBASIC16.09■□□□□ 0.17
Sec61a1P61620 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sec61a1P61620 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sec61a1P61620 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sec61a1P61620 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sec61a1P61620 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Sec61a1P61620 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Sec61a1P61620 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Sec61a1P61620 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.08■□□□□ 0.17
Sec61a1P61620 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Sec61a1P61620 Gm45640-201ENSMUST00000210665 1896 ntBASIC16.08■□□□□ 0.17
Sec61a1P61620 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Sec61a1P61620 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC16.08■□□□□ 0.16
Sec61a1P61620 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC16.08■□□□□ 0.16
Sec61a1P61620 Gm42642-201ENSMUST00000200683 355 ntBASIC16.08■□□□□ 0.16
Sec61a1P61620 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sec61a1P61620 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sec61a1P61620 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sec61a1P61620 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sec61a1P61620 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC16.08■□□□□ 0.16
Sec61a1P61620 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sec61a1P61620 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sec61a1P61620 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sec61a1P61620 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sec61a1P61620 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sec61a1P61620 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sec61a1P61620 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Sec61a1P61620 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.07■□□□□ 0.16
Sec61a1P61620 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Sec61a1P61620 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
Sec61a1P61620 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sec61a1P61620 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sec61a1P61620 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC16.07■□□□□ 0.16
Sec61a1P61620 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
Sec61a1P61620 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sec61a1P61620 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sec61a1P61620 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC16.07■□□□□ 0.16
Sec61a1P61620 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sec61a1P61620 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sec61a1P61620 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Sec61a1P61620 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sec61a1P61620 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Sec61a1P61620 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sec61a1P61620 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sec61a1P61620 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Sec61a1P61620 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sec61a1P61620 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Sec61a1P61620 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sec61a1P61620 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms