Protein–RNA interactions for Protein: P59114

Pcif1, Phosphorylated CTD-interacting factor 1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1P59114 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Pcif1P59114 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Pcif1P59114 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcif1P59114 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcif1P59114 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.58■□□□□ 0.88
Pcif1P59114 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcif1P59114 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcif1P59114 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pcif1P59114 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC20.57■□□□□ 0.88
Pcif1P59114 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcif1P59114 Gm7856-201ENSMUST00000117514 1493 ntBASIC20.57■□□□□ 0.88
Pcif1P59114 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcif1P59114 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcif1P59114 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Pcif1P59114 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcif1P59114 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Pcif1P59114 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC20.57■□□□□ 0.88
Pcif1P59114 Gm10653-202ENSMUST00000139570 835 ntBASIC20.57■□□□□ 0.88
Pcif1P59114 Gm22325-201ENSMUST00000158904 308 ntBASIC20.57■□□□□ 0.88
Pcif1P59114 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcif1P59114 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcif1P59114 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pcif1P59114 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcif1P59114 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcif1P59114 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcif1P59114 Gm12896-201ENSMUST00000118430 226 ntBASIC20.56■□□□□ 0.88
Pcif1P59114 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC20.56■□□□□ 0.88
Pcif1P59114 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC20.56■□□□□ 0.88
Pcif1P59114 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcif1P59114 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcif1P59114 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcif1P59114 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Pcif1P59114 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcif1P59114 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcif1P59114 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcif1P59114 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcif1P59114 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcif1P59114 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcif1P59114 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcif1P59114 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC20.55■□□□□ 0.88
Pcif1P59114 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcif1P59114 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pcif1P59114 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC20.55■□□□□ 0.88
Pcif1P59114 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcif1P59114 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Pcif1P59114 Gm42922-201ENSMUST00000195887 2078 ntBASIC20.55■□□□□ 0.88
Pcif1P59114 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcif1P59114 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcif1P59114 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcif1P59114 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Pcif1P59114 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcif1P59114 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Pcif1P59114 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcif1P59114 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcif1P59114 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Pcif1P59114 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Pcif1P59114 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Pcif1P59114 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcif1P59114 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Pcif1P59114 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcif1P59114 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcif1P59114 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcif1P59114 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
Pcif1P59114 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Pcif1P59114 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC20.53■□□□□ 0.88
Pcif1P59114 Gm2559-201ENSMUST00000201323 363 ntBASIC20.53■□□□□ 0.88
Pcif1P59114 AC112142.1-201ENSMUST00000228796 918 ntBASIC20.53■□□□□ 0.88
Pcif1P59114 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcif1P59114 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcif1P59114 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Pcif1P59114 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC20.53■□□□□ 0.88
Pcif1P59114 Gm6627-201ENSMUST00000218299 2386 ntBASIC20.53■□□□□ 0.88
Pcif1P59114 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcif1P59114 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Pcif1P59114 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcif1P59114 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcif1P59114 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcif1P59114 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcif1P59114 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Pcif1P59114 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcif1P59114 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcif1P59114 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcif1P59114 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcif1P59114 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Pcif1P59114 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Pcif1P59114 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Pcif1P59114 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
Pcif1P59114 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.51■□□□□ 0.87
Pcif1P59114 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pcif1P59114 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcif1P59114 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pcif1P59114 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC20.51■□□□□ 0.87
Pcif1P59114 Gm27275-201ENSMUST00000184318 272 ntBASIC20.51■□□□□ 0.87
Pcif1P59114 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pcif1P59114 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC20.51■□□□□ 0.87
Pcif1P59114 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC20.51■□□□□ 0.87
Pcif1P59114 Gm37856-201ENSMUST00000191634 999 ntBASIC20.51■□□□□ 0.87
Pcif1P59114 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcif1P59114 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcif1P59114 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms