Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NcanP55066 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NcanP55066 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NcanP55066 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
NcanP55066 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
NcanP55066 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
NcanP55066 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.45■□□□□ 0.7
NcanP55066 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC19.45■□□□□ 0.7
NcanP55066 Gm4217-201ENSMUST00000182243 1002 ntBASIC19.45■□□□□ 0.7
NcanP55066 Gm37935-201ENSMUST00000192012 982 ntBASIC19.45■□□□□ 0.7
NcanP55066 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NcanP55066 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC19.45■□□□□ 0.7
NcanP55066 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NcanP55066 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NcanP55066 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NcanP55066 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NcanP55066 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC19.45■□□□□ 0.7
NcanP55066 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NcanP55066 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
NcanP55066 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
NcanP55066 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NcanP55066 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NcanP55066 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
NcanP55066 Gm27704-201ENSMUST00000185094 107 ntBASIC19.44■□□□□ 0.7
NcanP55066 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NcanP55066 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
NcanP55066 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NcanP55066 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NcanP55066 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NcanP55066 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NcanP55066 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NcanP55066 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
NcanP55066 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
NcanP55066 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC19.44■□□□□ 0.7
NcanP55066 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NcanP55066 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NcanP55066 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NcanP55066 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC19.43■□□□□ 0.7
NcanP55066 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC19.43■□□□□ 0.7
NcanP55066 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NcanP55066 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
NcanP55066 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NcanP55066 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NcanP55066 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
NcanP55066 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NcanP55066 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NcanP55066 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NcanP55066 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NcanP55066 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NcanP55066 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.42■□□□□ 0.7
NcanP55066 Gm25016-201ENSMUST00000158399 131 ntBASIC19.42■□□□□ 0.7
NcanP55066 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NcanP55066 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NcanP55066 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NcanP55066 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NcanP55066 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NcanP55066 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
NcanP55066 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NcanP55066 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NcanP55066 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NcanP55066 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
NcanP55066 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC19.41■□□□□ 0.7
NcanP55066 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NcanP55066 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC19.41■□□□□ 0.7
NcanP55066 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NcanP55066 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NcanP55066 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
NcanP55066 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC19.4■□□□□ 0.7
NcanP55066 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NcanP55066 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
NcanP55066 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NcanP55066 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.4■□□□□ 0.7
NcanP55066 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NcanP55066 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
NcanP55066 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
NcanP55066 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
NcanP55066 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NcanP55066 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
NcanP55066 Gm38027-201ENSMUST00000192315 235 ntBASIC19.39■□□□□ 0.69
NcanP55066 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC19.39■□□□□ 0.69
NcanP55066 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
NcanP55066 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NcanP55066 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NcanP55066 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NcanP55066 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
NcanP55066 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NcanP55066 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
NcanP55066 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
NcanP55066 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NcanP55066 Gm17807-201ENSMUST00000186869 298 ntBASIC19.38■□□□□ 0.69
NcanP55066 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NcanP55066 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.38■□□□□ 0.69
NcanP55066 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NcanP55066 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
NcanP55066 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NcanP55066 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
NcanP55066 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NcanP55066 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
NcanP55066 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
NcanP55066 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms