Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Gm6659-201ENSMUST00000174752 547 ntBASIC18.16■□□□□ 0.5
Atxn1P54254 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atxn1P54254 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atxn1P54254 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atxn1P54254 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atxn1P54254 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Atxn1P54254 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Atxn1P54254 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.16■□□□□ 0.5
Atxn1P54254 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atxn1P54254 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atxn1P54254 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atxn1P54254 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Atxn1P54254 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atxn1P54254 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Atxn1P54254 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atxn1P54254 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atxn1P54254 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Atxn1P54254 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.15■□□□□ 0.5
Atxn1P54254 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC18.15■□□□□ 0.5
Atxn1P54254 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atxn1P54254 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atxn1P54254 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atxn1P54254 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.15■□□□□ 0.5
Atxn1P54254 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.15■□□□□ 0.5
Atxn1P54254 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atxn1P54254 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atxn1P54254 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Atxn1P54254 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Atxn1P54254 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Atxn1P54254 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Atxn1P54254 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Atxn1P54254 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.14■□□□□ 0.49
Atxn1P54254 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.14■□□□□ 0.49
Atxn1P54254 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.14■□□□□ 0.49
Atxn1P54254 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Atxn1P54254 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Atxn1P54254 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Atxn1P54254 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
Atxn1P54254 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Atxn1P54254 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atxn1P54254 AA386476-201ENSMUST00000098781 1665 ntBASIC18.13■□□□□ 0.49
Atxn1P54254 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atxn1P54254 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC18.13■□□□□ 0.49
Atxn1P54254 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atxn1P54254 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Atxn1P54254 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atxn1P54254 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atxn1P54254 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atxn1P54254 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atxn1P54254 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atxn1P54254 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atxn1P54254 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Atxn1P54254 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.12■□□□□ 0.49
Atxn1P54254 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Atxn1P54254 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atxn1P54254 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Atxn1P54254 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atxn1P54254 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Atxn1P54254 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.12■□□□□ 0.49
Atxn1P54254 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.12■□□□□ 0.49
Atxn1P54254 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
Atxn1P54254 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Atxn1P54254 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Atxn1P54254 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Atxn1P54254 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atxn1P54254 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atxn1P54254 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atxn1P54254 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atxn1P54254 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Atxn1P54254 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Atxn1P54254 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.11■□□□□ 0.49
Atxn1P54254 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Atxn1P54254 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Atxn1P54254 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Atxn1P54254 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.11■□□□□ 0.49
Atxn1P54254 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Atxn1P54254 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC18.11■□□□□ 0.49
Atxn1P54254 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Atxn1P54254 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Atxn1P54254 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Atxn1P54254 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Atxn1P54254 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Atxn1P54254 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.1■□□□□ 0.49
Atxn1P54254 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Atxn1P54254 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atxn1P54254 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atxn1P54254 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Atxn1P54254 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Atxn1P54254 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Atxn1P54254 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Atxn1P54254 Gm30025-201ENSMUST00000218555 728 ntBASIC18.1■□□□□ 0.49
Atxn1P54254 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atxn1P54254 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atxn1P54254 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atxn1P54254 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atxn1P54254 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Atxn1P54254 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atxn1P54254 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Atxn1P54254 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atxn1P54254 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms