Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
LtbrP50284 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LtbrP50284 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
LtbrP50284 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
LtbrP50284 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LtbrP50284 Gm43672-201ENSMUST00000199072 1731 ntBASIC21.56■■□□□ 1.04
LtbrP50284 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LtbrP50284 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
LtbrP50284 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LtbrP50284 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
LtbrP50284 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
LtbrP50284 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC21.56■■□□□ 1.04
LtbrP50284 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC21.55■■□□□ 1.04
LtbrP50284 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LtbrP50284 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LtbrP50284 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LtbrP50284 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
LtbrP50284 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
LtbrP50284 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LtbrP50284 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
LtbrP50284 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC21.55■■□□□ 1.04
LtbrP50284 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
LtbrP50284 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LtbrP50284 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LtbrP50284 Arhgef4-208ENSMUST00000211073 171 ntBASIC21.55■■□□□ 1.04
LtbrP50284 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LtbrP50284 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LtbrP50284 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LtbrP50284 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LtbrP50284 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
LtbrP50284 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
LtbrP50284 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LtbrP50284 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
LtbrP50284 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC21.54■■□□□ 1.04
LtbrP50284 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC21.54■■□□□ 1.04
LtbrP50284 Gm11539-201ENSMUST00000119837 557 ntBASIC21.54■■□□□ 1.04
LtbrP50284 Gm13436-201ENSMUST00000120418 567 ntBASIC21.54■■□□□ 1.04
LtbrP50284 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC21.54■■□□□ 1.04
LtbrP50284 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC21.54■■□□□ 1.04
LtbrP50284 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LtbrP50284 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
LtbrP50284 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LtbrP50284 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC21.54■■□□□ 1.04
LtbrP50284 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LtbrP50284 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
LtbrP50284 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
LtbrP50284 Gm7889-201ENSMUST00000185591 958 ntBASIC21.53■■□□□ 1.04
LtbrP50284 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC21.53■■□□□ 1.04
LtbrP50284 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
LtbrP50284 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LtbrP50284 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LtbrP50284 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LtbrP50284 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
LtbrP50284 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
LtbrP50284 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
LtbrP50284 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LtbrP50284 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
LtbrP50284 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC21.52■■□□□ 1.04
LtbrP50284 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC21.52■■□□□ 1.04
LtbrP50284 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC21.52■■□□□ 1.04
LtbrP50284 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LtbrP50284 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC21.52■■□□□ 1.04
LtbrP50284 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
LtbrP50284 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
LtbrP50284 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
LtbrP50284 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.03
LtbrP50284 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
LtbrP50284 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LtbrP50284 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LtbrP50284 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LtbrP50284 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LtbrP50284 Golph3-205ENSMUST00000228671 2842 ntBASIC21.51■■□□□ 1.03
LtbrP50284 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LtbrP50284 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC21.51■■□□□ 1.03
LtbrP50284 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
LtbrP50284 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LtbrP50284 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC21.51■■□□□ 1.03
LtbrP50284 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC21.51■■□□□ 1.03
LtbrP50284 Gm44487-201ENSMUST00000205145 325 ntBASIC21.51■■□□□ 1.03
LtbrP50284 AC140264.2-202ENSMUST00000218746 817 ntBASIC21.51■■□□□ 1.03
LtbrP50284 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
LtbrP50284 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LtbrP50284 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LtbrP50284 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
LtbrP50284 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LtbrP50284 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LtbrP50284 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
LtbrP50284 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LtbrP50284 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LtbrP50284 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
LtbrP50284 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LtbrP50284 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
LtbrP50284 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC21.49■■□□□ 1.03
LtbrP50284 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LtbrP50284 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC21.49■■□□□ 1.03
LtbrP50284 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LtbrP50284 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LtbrP50284 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LtbrP50284 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
LtbrP50284 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC21.49■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms