Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Gm3807-201ENSMUST00000193520 1168 ntBASIC21.71■■□□□ 1.07
Ercc3P49135 AC160393.1-201ENSMUST00000218378 1279 ntBASIC21.71■■□□□ 1.07
Ercc3P49135 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ercc3P49135 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ercc3P49135 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Ercc3P49135 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ercc3P49135 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ercc3P49135 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.07
Ercc3P49135 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Ercc3P49135 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC21.7■■□□□ 1.06
Ercc3P49135 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ercc3P49135 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ercc3P49135 Gm6627-201ENSMUST00000218299 2386 ntBASIC21.7■■□□□ 1.06
Ercc3P49135 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ercc3P49135 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Ercc3P49135 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Ercc3P49135 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Ercc3P49135 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ercc3P49135 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ercc3P49135 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ercc3P49135 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ercc3P49135 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC21.69■■□□□ 1.06
Ercc3P49135 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC21.69■■□□□ 1.06
Ercc3P49135 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
Ercc3P49135 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Ercc3P49135 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Ercc3P49135 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ercc3P49135 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ercc3P49135 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ercc3P49135 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC21.69■■□□□ 1.06
Ercc3P49135 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ercc3P49135 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC21.69■■□□□ 1.06
Ercc3P49135 AC122769.4-201ENSMUST00000228166 901 ntBASIC21.69■■□□□ 1.06
Ercc3P49135 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ercc3P49135 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ercc3P49135 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Ercc3P49135 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Ercc3P49135 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Ercc3P49135 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ercc3P49135 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Ercc3P49135 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC21.69■■□□□ 1.06
Ercc3P49135 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ercc3P49135 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ercc3P49135 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ercc3P49135 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ercc3P49135 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ercc3P49135 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC21.68■■□□□ 1.06
Ercc3P49135 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC21.68■■□□□ 1.06
Ercc3P49135 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Ercc3P49135 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ercc3P49135 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Ercc3P49135 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Ercc3P49135 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ercc3P49135 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC21.67■■□□□ 1.06
Ercc3P49135 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Ercc3P49135 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Ercc3P49135 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ercc3P49135 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Ercc3P49135 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC21.67■■□□□ 1.06
Ercc3P49135 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ercc3P49135 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ercc3P49135 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ercc3P49135 Dmtn-210ENSMUST00000228824 2377 ntBASIC21.67■■□□□ 1.06
Ercc3P49135 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ercc3P49135 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ercc3P49135 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC21.66■■□□□ 1.06
Ercc3P49135 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ercc3P49135 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Ercc3P49135 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ercc3P49135 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Ercc3P49135 Gm12441-201ENSMUST00000121806 588 ntBASIC21.66■■□□□ 1.06
Ercc3P49135 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Ercc3P49135 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Ercc3P49135 Gm27011-201ENSMUST00000182352 972 ntBASIC21.66■■□□□ 1.06
Ercc3P49135 Rab3c-203ENSMUST00000224180 967 ntBASIC21.66■■□□□ 1.06
Ercc3P49135 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC21.66■■□□□ 1.06
Ercc3P49135 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ercc3P49135 Fam105a-203ENSMUST00000226170 3043 ntBASIC21.66■■□□□ 1.06
Ercc3P49135 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Ercc3P49135 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC21.66■■□□□ 1.06
Ercc3P49135 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
Ercc3P49135 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC21.65■■□□□ 1.06
Ercc3P49135 Gm37805-201ENSMUST00000192612 1094 ntBASIC21.65■■□□□ 1.06
Ercc3P49135 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Ercc3P49135 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ercc3P49135 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Ercc3P49135 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ercc3P49135 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ercc3P49135 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ercc3P49135 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ercc3P49135 Gm5112-201ENSMUST00000204407 2368 ntBASIC21.65■■□□□ 1.06
Ercc3P49135 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Ercc3P49135 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Ercc3P49135 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ercc3P49135 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ercc3P49135 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Ercc3P49135 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ercc3P49135 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC21.64■■□□□ 1.05
Ercc3P49135 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ercc3P49135 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms