Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Brca1P48754 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Brca1P48754 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Brca1P48754 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Brca1P48754 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Brca1P48754 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
Brca1P48754 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC20.8■□□□□ 0.92
Brca1P48754 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC20.8■□□□□ 0.92
Brca1P48754 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC20.8■□□□□ 0.92
Brca1P48754 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Brca1P48754 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Brca1P48754 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Brca1P48754 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC20.79■□□□□ 0.92
Brca1P48754 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Brca1P48754 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Brca1P48754 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Brca1P48754 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC20.79■□□□□ 0.92
Brca1P48754 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC20.79■□□□□ 0.92
Brca1P48754 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Brca1P48754 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Brca1P48754 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.79■□□□□ 0.92
Brca1P48754 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Brca1P48754 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC20.78■□□□□ 0.92
Brca1P48754 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Brca1P48754 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Brca1P48754 AC159205.3-201ENSMUST00000224614 874 ntBASIC20.78■□□□□ 0.92
Brca1P48754 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Brca1P48754 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Brca1P48754 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Brca1P48754 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Brca1P48754 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Brca1P48754 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Brca1P48754 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Brca1P48754 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Brca1P48754 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Brca1P48754 AC154471.1-201ENSMUST00000224418 436 ntBASIC20.78■□□□□ 0.92
Brca1P48754 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Brca1P48754 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Brca1P48754 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Brca1P48754 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
Brca1P48754 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Brca1P48754 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Brca1P48754 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Brca1P48754 Gm15853-202ENSMUST00000195518 2041 ntBASIC20.77■□□□□ 0.92
Brca1P48754 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.77■□□□□ 0.92
Brca1P48754 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Brca1P48754 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC20.77■□□□□ 0.92
Brca1P48754 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Brca1P48754 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Brca1P48754 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Brca1P48754 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Brca1P48754 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Brca1P48754 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Brca1P48754 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Brca1P48754 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
Brca1P48754 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC20.76■□□□□ 0.91
Brca1P48754 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Brca1P48754 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Brca1P48754 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Brca1P48754 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Brca1P48754 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Brca1P48754 Gm45058-201ENSMUST00000205810 766 ntBASIC20.76■□□□□ 0.91
Brca1P48754 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Brca1P48754 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Brca1P48754 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Brca1P48754 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Brca1P48754 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Brca1P48754 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Brca1P48754 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Brca1P48754 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Brca1P48754 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Brca1P48754 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Brca1P48754 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Brca1P48754 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Brca1P48754 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Brca1P48754 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.74■□□□□ 0.91
Brca1P48754 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Brca1P48754 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Brca1P48754 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Brca1P48754 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Brca1P48754 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Brca1P48754 AC134329.2-201ENSMUST00000217897 428 ntBASIC20.74■□□□□ 0.91
Brca1P48754 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Brca1P48754 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Brca1P48754 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Brca1P48754 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.74■□□□□ 0.91
Brca1P48754 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Brca1P48754 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC20.74■□□□□ 0.91
Brca1P48754 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Brca1P48754 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC20.74■□□□□ 0.91
Brca1P48754 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Brca1P48754 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC20.74■□□□□ 0.91
Brca1P48754 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Brca1P48754 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Brca1P48754 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Brca1P48754 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
Brca1P48754 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Brca1P48754 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Brca1P48754 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Brca1P48754 Gm10654-201ENSMUST00000098653 1633 ntBASIC20.73■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms