Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rfx3P48381 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rfx3P48381 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rfx3P48381 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rfx3P48381 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Rfx3P48381 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
Rfx3P48381 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC16.55■□□□□ 0.24
Rfx3P48381 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rfx3P48381 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rfx3P48381 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.55■□□□□ 0.24
Rfx3P48381 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rfx3P48381 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rfx3P48381 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rfx3P48381 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rfx3P48381 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rfx3P48381 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rfx3P48381 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rfx3P48381 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rfx3P48381 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rfx3P48381 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rfx3P48381 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rfx3P48381 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rfx3P48381 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rfx3P48381 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rfx3P48381 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rfx3P48381 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rfx3P48381 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rfx3P48381 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Rfx3P48381 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rfx3P48381 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rfx3P48381 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rfx3P48381 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rfx3P48381 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Rfx3P48381 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rfx3P48381 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Rfx3P48381 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rfx3P48381 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.54■□□□□ 0.24
Rfx3P48381 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rfx3P48381 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rfx3P48381 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Rfx3P48381 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Rfx3P48381 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rfx3P48381 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Rfx3P48381 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rfx3P48381 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rfx3P48381 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.53■□□□□ 0.24
Rfx3P48381 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rfx3P48381 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Rfx3P48381 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Rfx3P48381 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC16.53■□□□□ 0.24
Rfx3P48381 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rfx3P48381 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC16.53■□□□□ 0.24
Rfx3P48381 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rfx3P48381 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rfx3P48381 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rfx3P48381 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rfx3P48381 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Rfx3P48381 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rfx3P48381 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Rfx3P48381 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rfx3P48381 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rfx3P48381 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Rfx3P48381 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Rfx3P48381 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rfx3P48381 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rfx3P48381 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rfx3P48381 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rfx3P48381 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rfx3P48381 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC16.52■□□□□ 0.24
Rfx3P48381 Gm38205-201ENSMUST00000192243 258 ntBASIC16.52■□□□□ 0.24
Rfx3P48381 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC16.52■□□□□ 0.24
Rfx3P48381 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rfx3P48381 Gm9988-201ENSMUST00000069786 435 ntBASIC16.52■□□□□ 0.24
Rfx3P48381 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
Rfx3P48381 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Rfx3P48381 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rfx3P48381 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.52■□□□□ 0.23
Rfx3P48381 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfx3P48381 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfx3P48381 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfx3P48381 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfx3P48381 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfx3P48381 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfx3P48381 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Rfx3P48381 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rfx3P48381 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rfx3P48381 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfx3P48381 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
Rfx3P48381 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rfx3P48381 Gm27032-201ENSMUST00000183124 1116 ntBASIC16.51■□□□□ 0.23
Rfx3P48381 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfx3P48381 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfx3P48381 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rfx3P48381 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfx3P48381 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfx3P48381 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rfx3P48381 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Rfx3P48381 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfx3P48381 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfx3P48381 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms