Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vps4bP46467 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.61■□□□□ 0.57
Vps4bP46467 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps4bP46467 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps4bP46467 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps4bP46467 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Vps4bP46467 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Vps4bP46467 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Vps4bP46467 Gm7291-201ENSMUST00000199147 382 ntBASIC18.6■□□□□ 0.57
Vps4bP46467 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.6■□□□□ 0.57
Vps4bP46467 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps4bP46467 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Vps4bP46467 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps4bP46467 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
Vps4bP46467 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps4bP46467 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps4bP46467 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps4bP46467 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Vps4bP46467 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps4bP46467 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Vps4bP46467 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.6■□□□□ 0.57
Vps4bP46467 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.6■□□□□ 0.57
Vps4bP46467 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps4bP46467 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vps4bP46467 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vps4bP46467 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vps4bP46467 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vps4bP46467 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vps4bP46467 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.59■□□□□ 0.57
Vps4bP46467 Gm13146-201ENSMUST00000118508 780 ntBASIC18.59■□□□□ 0.57
Vps4bP46467 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
Vps4bP46467 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Vps4bP46467 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Vps4bP46467 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Vps4bP46467 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Vps4bP46467 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Vps4bP46467 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.58■□□□□ 0.56
Vps4bP46467 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Vps4bP46467 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Vps4bP46467 Grk6-206ENSMUST00000224995 2971 ntBASIC18.58■□□□□ 0.56
Vps4bP46467 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Vps4bP46467 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Vps4bP46467 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Vps4bP46467 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.58■□□□□ 0.56
Vps4bP46467 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.58■□□□□ 0.56
Vps4bP46467 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.57■□□□□ 0.56
Vps4bP46467 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.57■□□□□ 0.56
Vps4bP46467 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vps4bP46467 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vps4bP46467 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.57■□□□□ 0.56
Vps4bP46467 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vps4bP46467 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vps4bP46467 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Vps4bP46467 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.57■□□□□ 0.56
Vps4bP46467 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.57■□□□□ 0.56
Vps4bP46467 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
Vps4bP46467 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Vps4bP46467 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.57■□□□□ 0.56
Vps4bP46467 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Vps4bP46467 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.57■□□□□ 0.56
Vps4bP46467 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Vps4bP46467 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Vps4bP46467 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vps4bP46467 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.57■□□□□ 0.56
Vps4bP46467 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Vps4bP46467 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vps4bP46467 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.56■□□□□ 0.56
Vps4bP46467 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vps4bP46467 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vps4bP46467 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vps4bP46467 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Vps4bP46467 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Vps4bP46467 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.56■□□□□ 0.56
Vps4bP46467 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.56■□□□□ 0.56
Vps4bP46467 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vps4bP46467 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.56■□□□□ 0.56
Vps4bP46467 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vps4bP46467 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vps4bP46467 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vps4bP46467 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vps4bP46467 Reep4-203ENSMUST00000226563 1444 ntBASIC18.56■□□□□ 0.56
Vps4bP46467 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vps4bP46467 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.56■□□□□ 0.56
Vps4bP46467 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vps4bP46467 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vps4bP46467 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vps4bP46467 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vps4bP46467 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vps4bP46467 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vps4bP46467 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.55■□□□□ 0.56
Vps4bP46467 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vps4bP46467 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Vps4bP46467 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vps4bP46467 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vps4bP46467 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vps4bP46467 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Vps4bP46467 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Vps4bP46467 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vps4bP46467 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Vps4bP46467 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms