Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC20.59■□□□□ 0.89
Sdc2P43407 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sdc2P43407 AC122335.2-201ENSMUST00000213901 6181 ntBASIC20.59■□□□□ 0.89
Sdc2P43407 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sdc2P43407 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Sdc2P43407 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sdc2P43407 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
Sdc2P43407 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sdc2P43407 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sdc2P43407 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sdc2P43407 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sdc2P43407 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Sdc2P43407 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC20.58■□□□□ 0.88
Sdc2P43407 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Sdc2P43407 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sdc2P43407 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC20.57■□□□□ 0.88
Sdc2P43407 Gm13146-201ENSMUST00000118508 780 ntBASIC20.57■□□□□ 0.88
Sdc2P43407 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Sdc2P43407 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Sdc2P43407 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sdc2P43407 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sdc2P43407 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Sdc2P43407 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Sdc2P43407 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.56■□□□□ 0.88
Sdc2P43407 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Sdc2P43407 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sdc2P43407 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sdc2P43407 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.56■□□□□ 0.88
Sdc2P43407 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC20.56■□□□□ 0.88
Sdc2P43407 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sdc2P43407 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sdc2P43407 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sdc2P43407 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Sdc2P43407 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sdc2P43407 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sdc2P43407 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Sdc2P43407 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Sdc2P43407 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sdc2P43407 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sdc2P43407 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Sdc2P43407 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
Sdc2P43407 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Sdc2P43407 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sdc2P43407 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sdc2P43407 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sdc2P43407 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sdc2P43407 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Sdc2P43407 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Sdc2P43407 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sdc2P43407 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sdc2P43407 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sdc2P43407 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sdc2P43407 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sdc2P43407 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.54■□□□□ 0.88
Sdc2P43407 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
Sdc2P43407 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC20.54■□□□□ 0.88
Sdc2P43407 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Sdc2P43407 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
Sdc2P43407 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sdc2P43407 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sdc2P43407 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sdc2P43407 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC20.54■□□□□ 0.88
Sdc2P43407 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sdc2P43407 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Sdc2P43407 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
Sdc2P43407 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Sdc2P43407 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC20.53■□□□□ 0.88
Sdc2P43407 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Sdc2P43407 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sdc2P43407 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC20.53■□□□□ 0.88
Sdc2P43407 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sdc2P43407 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.53■□□□□ 0.88
Sdc2P43407 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sdc2P43407 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Sdc2P43407 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sdc2P43407 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sdc2P43407 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sdc2P43407 Gm13534-201ENSMUST00000121169 513 ntBASIC20.52■□□□□ 0.88
Sdc2P43407 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sdc2P43407 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sdc2P43407 Gm37805-201ENSMUST00000192612 1094 ntBASIC20.52■□□□□ 0.88
Sdc2P43407 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.52■□□□□ 0.88
Sdc2P43407 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sdc2P43407 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Sdc2P43407 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Sdc2P43407 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Sdc2P43407 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sdc2P43407 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Sdc2P43407 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sdc2P43407 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC20.51■□□□□ 0.87
Sdc2P43407 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sdc2P43407 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
Sdc2P43407 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.51■□□□□ 0.87
Sdc2P43407 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sdc2P43407 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Sdc2P43407 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sdc2P43407 Gm9194-201ENSMUST00000220749 1447 ntBASIC20.51■□□□□ 0.87
Sdc2P43407 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sdc2P43407 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC20.51■□□□□ 0.87
Sdc2P43407 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms