Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Msh2P43247 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Msh2P43247 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Msh2P43247 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Msh2P43247 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Msh2P43247 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.86■□□□□ 0.61
Msh2P43247 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Msh2P43247 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.86■□□□□ 0.61
Msh2P43247 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Msh2P43247 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.86■□□□□ 0.61
Msh2P43247 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Msh2P43247 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Msh2P43247 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Msh2P43247 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Msh2P43247 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Msh2P43247 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.85■□□□□ 0.61
Msh2P43247 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Msh2P43247 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Msh2P43247 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.85■□□□□ 0.61
Msh2P43247 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Msh2P43247 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.85■□□□□ 0.61
Msh2P43247 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Msh2P43247 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Msh2P43247 Gm8495-201ENSMUST00000188740 694 ntBASIC18.85■□□□□ 0.61
Msh2P43247 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.85■□□□□ 0.61
Msh2P43247 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
Msh2P43247 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Msh2P43247 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Msh2P43247 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Msh2P43247 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Msh2P43247 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Msh2P43247 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Msh2P43247 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.84■□□□□ 0.61
Msh2P43247 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Msh2P43247 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Msh2P43247 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Msh2P43247 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Msh2P43247 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Msh2P43247 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Msh2P43247 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Msh2P43247 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Msh2P43247 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Msh2P43247 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Msh2P43247 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Msh2P43247 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.83■□□□□ 0.61
Msh2P43247 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
Msh2P43247 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Msh2P43247 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Msh2P43247 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Msh2P43247 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Msh2P43247 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Msh2P43247 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Msh2P43247 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Msh2P43247 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.83■□□□□ 0.6
Msh2P43247 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.83■□□□□ 0.6
Msh2P43247 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Msh2P43247 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Msh2P43247 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Msh2P43247 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Msh2P43247 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Msh2P43247 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.82■□□□□ 0.6
Msh2P43247 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.82■□□□□ 0.6
Msh2P43247 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Msh2P43247 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Msh2P43247 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.82■□□□□ 0.6
Msh2P43247 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Msh2P43247 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.82■□□□□ 0.6
Msh2P43247 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.82■□□□□ 0.6
Msh2P43247 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Msh2P43247 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Msh2P43247 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Msh2P43247 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Msh2P43247 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Msh2P43247 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Msh2P43247 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Msh2P43247 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.81■□□□□ 0.6
Msh2P43247 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Msh2P43247 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Msh2P43247 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Msh2P43247 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.81■□□□□ 0.6
Msh2P43247 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Msh2P43247 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Msh2P43247 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.81■□□□□ 0.6
Msh2P43247 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Msh2P43247 Reep4-203ENSMUST00000226563 1444 ntBASIC18.81■□□□□ 0.6
Msh2P43247 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Msh2P43247 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Msh2P43247 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Msh2P43247 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Msh2P43247 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Msh2P43247 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Msh2P43247 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
Msh2P43247 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.8■□□□□ 0.6
Msh2P43247 Gm42778-201ENSMUST00000199644 553 ntBASIC18.8■□□□□ 0.6
Msh2P43247 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Msh2P43247 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.8■□□□□ 0.6
Msh2P43247 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Msh2P43247 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.8■□□□□ 0.6
Msh2P43247 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Msh2P43247 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms