Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx2-2P42586 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx2-2P42586 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Nkx2-2P42586 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx2-2P42586 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx2-2P42586 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx2-2P42586 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx2-2P42586 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC16.81■□□□□ 0.28
Nkx2-2P42586 Mir5133-201ENSMUST00000174955 77 ntBASIC16.81■□□□□ 0.28
Nkx2-2P42586 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC16.81■□□□□ 0.28
Nkx2-2P42586 AC164629.5-201ENSMUST00000220387 632 ntBASIC16.81■□□□□ 0.28
Nkx2-2P42586 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx2-2P42586 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx2-2P42586 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.81■□□□□ 0.28
Nkx2-2P42586 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx2-2P42586 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx2-2P42586 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx2-2P42586 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Nkx2-2P42586 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx2-2P42586 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx2-2P42586 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.8■□□□□ 0.28
Nkx2-2P42586 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx2-2P42586 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx2-2P42586 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx2-2P42586 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx2-2P42586 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.8■□□□□ 0.28
Nkx2-2P42586 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx2-2P42586 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx2-2P42586 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx2-2P42586 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC16.8■□□□□ 0.28
Nkx2-2P42586 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Nkx2-2P42586 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Nkx2-2P42586 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC16.8■□□□□ 0.28
Nkx2-2P42586 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx2-2P42586 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx2-2P42586 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx2-2P42586 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx2-2P42586 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx2-2P42586 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Nkx2-2P42586 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
Nkx2-2P42586 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx2-2P42586 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx2-2P42586 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx2-2P42586 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Nkx2-2P42586 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Nkx2-2P42586 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Nkx2-2P42586 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.79■□□□□ 0.28
Nkx2-2P42586 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx2-2P42586 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx2-2P42586 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx2-2P42586 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx2-2P42586 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx2-2P42586 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx2-2P42586 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx2-2P42586 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx2-2P42586 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Nkx2-2P42586 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx2-2P42586 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx2-2P42586 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx2-2P42586 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Nkx2-2P42586 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx2-2P42586 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx2-2P42586 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx2-2P42586 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx2-2P42586 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx2-2P42586 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx2-2P42586 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Nkx2-2P42586 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.78■□□□□ 0.28
Nkx2-2P42586 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx2-2P42586 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx2-2P42586 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx2-2P42586 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Nkx2-2P42586 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC16.78■□□□□ 0.28
Nkx2-2P42586 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx2-2P42586 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Nkx2-2P42586 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx2-2P42586 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.78■□□□□ 0.28
Nkx2-2P42586 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Nkx2-2P42586 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx2-2P42586 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx2-2P42586 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nkx2-2P42586 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.77■□□□□ 0.28
Nkx2-2P42586 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nkx2-2P42586 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nkx2-2P42586 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Nkx2-2P42586 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Nkx2-2P42586 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC16.77■□□□□ 0.28
Nkx2-2P42586 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Nkx2-2P42586 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Nkx2-2P42586 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nkx2-2P42586 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Nkx2-2P42586 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Nkx2-2P42586 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Nkx2-2P42586 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Nkx2-2P42586 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nkx2-2P42586 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nkx2-2P42586 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.77■□□□□ 0.27
Nkx2-2P42586 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nkx2-2P42586 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Nkx2-2P42586 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms