Protein–RNA interactions for Protein: P41274

Tnfsf9, Tumor necrosis factor ligand superfamily member 9, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf9P41274 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Tnfsf9P41274 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tnfsf9P41274 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tnfsf9P41274 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tnfsf9P41274 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.54■□□□□ 0.4
Tnfsf9P41274 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Tnfsf9P41274 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tnfsf9P41274 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Tnfsf9P41274 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Tnfsf9P41274 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tnfsf9P41274 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tnfsf9P41274 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tnfsf9P41274 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tnfsf9P41274 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tnfsf9P41274 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tnfsf9P41274 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tnfsf9P41274 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tnfsf9P41274 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tnfsf9P41274 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tnfsf9P41274 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
Tnfsf9P41274 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tnfsf9P41274 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Tnfsf9P41274 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Tnfsf9P41274 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tnfsf9P41274 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Tnfsf9P41274 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Tnfsf9P41274 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Tnfsf9P41274 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.39
Tnfsf9P41274 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Tnfsf9P41274 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Tnfsf9P41274 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Tnfsf9P41274 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Tnfsf9P41274 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tnfsf9P41274 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Tnfsf9P41274 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.51■□□□□ 0.39
Tnfsf9P41274 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.51■□□□□ 0.39
Tnfsf9P41274 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.51■□□□□ 0.39
Tnfsf9P41274 Gm22325-201ENSMUST00000158904 308 ntBASIC17.51■□□□□ 0.39
Tnfsf9P41274 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.51■□□□□ 0.39
Tnfsf9P41274 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tnfsf9P41274 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tnfsf9P41274 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tnfsf9P41274 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.51■□□□□ 0.39
Tnfsf9P41274 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tnfsf9P41274 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tnfsf9P41274 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tnfsf9P41274 Flg-201ENSMUST00000050758 1488 ntBASIC17.5■□□□□ 0.39
Tnfsf9P41274 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Tnfsf9P41274 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Tnfsf9P41274 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tnfsf9P41274 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Tnfsf9P41274 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tnfsf9P41274 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.5■□□□□ 0.39
Tnfsf9P41274 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.5■□□□□ 0.39
Tnfsf9P41274 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.5■□□□□ 0.39
Tnfsf9P41274 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
Tnfsf9P41274 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tnfsf9P41274 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tnfsf9P41274 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Tnfsf9P41274 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tnfsf9P41274 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.5■□□□□ 0.39
Tnfsf9P41274 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Tnfsf9P41274 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
Tnfsf9P41274 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.5■□□□□ 0.39
Tnfsf9P41274 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tnfsf9P41274 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Tnfsf9P41274 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Tnfsf9P41274 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Tnfsf9P41274 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Tnfsf9P41274 Gm11249-201ENSMUST00000117071 859 ntBASIC17.49■□□□□ 0.39
Tnfsf9P41274 Gm18666-201ENSMUST00000190039 958 ntBASIC17.49■□□□□ 0.39
Tnfsf9P41274 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Tnfsf9P41274 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.49■□□□□ 0.39
Tnfsf9P41274 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tnfsf9P41274 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tnfsf9P41274 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tnfsf9P41274 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tnfsf9P41274 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tnfsf9P41274 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tnfsf9P41274 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tnfsf9P41274 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Tnfsf9P41274 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Tnfsf9P41274 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tnfsf9P41274 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Tnfsf9P41274 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Tnfsf9P41274 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Tnfsf9P41274 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tnfsf9P41274 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Tnfsf9P41274 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.48■□□□□ 0.39
Tnfsf9P41274 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Tnfsf9P41274 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tnfsf9P41274 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tnfsf9P41274 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Tnfsf9P41274 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
Tnfsf9P41274 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tnfsf9P41274 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
Tnfsf9P41274 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tnfsf9P41274 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Tnfsf9P41274 Gm5643-201ENSMUST00000117081 966 ntBASIC17.47■□□□□ 0.39
Tnfsf9P41274 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms