Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Abca1P41233 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Abca1P41233 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Abca1P41233 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Abca1P41233 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Abca1P41233 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Abca1P41233 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC15.16■□□□□ 0.02
Abca1P41233 Gm6433-201ENSMUST00000118634 875 ntBASIC15.16■□□□□ 0.02
Abca1P41233 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Abca1P41233 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Abca1P41233 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Abca1P41233 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Abca1P41233 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Abca1P41233 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Abca1P41233 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Abca1P41233 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC15.15■□□□□ 0.02
Abca1P41233 H2-K2-201ENSMUST00000174250 1049 ntBASIC15.15■□□□□ 0.02
Abca1P41233 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
Abca1P41233 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC15.15■□□□□ 0.02
Abca1P41233 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Abca1P41233 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Abca1P41233 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Abca1P41233 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC15.15■□□□□ 0.02
Abca1P41233 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Abca1P41233 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Abca1P41233 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Abca1P41233 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Abca1P41233 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC15.15■□□□□ 0.02
Abca1P41233 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Abca1P41233 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Abca1P41233 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Abca1P41233 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Abca1P41233 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Abca1P41233 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Abca1P41233 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Abca1P41233 Gm10167-201ENSMUST00000150411 1479 ntBASIC15.14■□□□□ 0.01
Abca1P41233 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Abca1P41233 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Abca1P41233 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Abca1P41233 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Abca1P41233 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Abca1P41233 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Abca1P41233 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Abca1P41233 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Abca1P41233 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Abca1P41233 Gm2399-201ENSMUST00000104944 225 ntBASIC15.14■□□□□ 0.01
Abca1P41233 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC15.14■□□□□ 0.01
Abca1P41233 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Abca1P41233 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Abca1P41233 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Abca1P41233 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Abca1P41233 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Abca1P41233 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Abca1P41233 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Abca1P41233 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Abca1P41233 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Abca1P41233 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Abca1P41233 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Abca1P41233 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Abca1P41233 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Abca1P41233 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Abca1P41233 Gm18666-201ENSMUST00000190039 958 ntBASIC15.13■□□□□ 0.01
Abca1P41233 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Abca1P41233 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Abca1P41233 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Abca1P41233 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Abca1P41233 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Abca1P41233 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Abca1P41233 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Abca1P41233 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Abca1P41233 Gm15847-201ENSMUST00000121417 1065 ntBASIC15.12■□□□□ 0.01
Abca1P41233 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Abca1P41233 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Abca1P41233 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Abca1P41233 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC15.12■□□□□ 0.01
Abca1P41233 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Abca1P41233 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Abca1P41233 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Abca1P41233 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Abca1P41233 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Abca1P41233 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Abca1P41233 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Abca1P41233 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Abca1P41233 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Abca1P41233 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Abca1P41233 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Abca1P41233 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Abca1P41233 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Abca1P41233 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC15.11■□□□□ 0.01
Abca1P41233 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC15.11■□□□□ 0.01
Abca1P41233 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC15.11■□□□□ 0.01
Abca1P41233 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Abca1P41233 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Abca1P41233 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Abca1P41233 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Abca1P41233 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC15.1■□□□□ 0.01
Abca1P41233 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Abca1P41233 Gm43799-201ENSMUST00000201845 579 ntBASIC15.1■□□□□ 0.01
Abca1P41233 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Abca1P41233 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms