Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
HmgclP38060 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
HmgclP38060 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
HmgclP38060 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.05■□□□□ 0.48
HmgclP38060 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HmgclP38060 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HmgclP38060 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.05■□□□□ 0.48
HmgclP38060 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HmgclP38060 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HmgclP38060 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HmgclP38060 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
HmgclP38060 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HmgclP38060 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HmgclP38060 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HmgclP38060 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HmgclP38060 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HmgclP38060 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HmgclP38060 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
HmgclP38060 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HmgclP38060 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HmgclP38060 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
HmgclP38060 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HmgclP38060 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HmgclP38060 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HmgclP38060 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HmgclP38060 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HmgclP38060 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HmgclP38060 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HmgclP38060 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HmgclP38060 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HmgclP38060 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HmgclP38060 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HmgclP38060 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
HmgclP38060 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HmgclP38060 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HmgclP38060 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HmgclP38060 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.03■□□□□ 0.48
HmgclP38060 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HmgclP38060 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HmgclP38060 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
HmgclP38060 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HmgclP38060 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.03■□□□□ 0.48
HmgclP38060 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
HmgclP38060 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
HmgclP38060 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
HmgclP38060 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
HmgclP38060 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HmgclP38060 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HmgclP38060 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
HmgclP38060 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HmgclP38060 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.02■□□□□ 0.48
HmgclP38060 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HmgclP38060 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HmgclP38060 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HmgclP38060 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HmgclP38060 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
HmgclP38060 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.02■□□□□ 0.48
HmgclP38060 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
HmgclP38060 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HmgclP38060 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.02■□□□□ 0.48
HmgclP38060 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HmgclP38060 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HmgclP38060 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
HmgclP38060 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.02■□□□□ 0.48
HmgclP38060 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HmgclP38060 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.02■□□□□ 0.47
HmgclP38060 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.02■□□□□ 0.47
HmgclP38060 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
HmgclP38060 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
HmgclP38060 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HmgclP38060 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
HmgclP38060 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.01■□□□□ 0.47
HmgclP38060 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HmgclP38060 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
HmgclP38060 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HmgclP38060 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
HmgclP38060 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
HmgclP38060 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
HmgclP38060 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HmgclP38060 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HmgclP38060 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
HmgclP38060 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HmgclP38060 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
HmgclP38060 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.01■□□□□ 0.47
HmgclP38060 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HmgclP38060 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
HmgclP38060 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HmgclP38060 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
HmgclP38060 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HmgclP38060 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18■□□□□ 0.47
HmgclP38060 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18■□□□□ 0.47
HmgclP38060 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18■□□□□ 0.47
HmgclP38060 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18■□□□□ 0.47
HmgclP38060 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HmgclP38060 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
HmgclP38060 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
HmgclP38060 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HmgclP38060 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HmgclP38060 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HmgclP38060 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms