Protein–RNA interactions for Protein: P35546

Ret, Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RetP35546 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RetP35546 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RetP35546 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.13■□□□□ 0.33
RetP35546 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
RetP35546 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.13■□□□□ 0.33
RetP35546 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RetP35546 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.13■□□□□ 0.33
RetP35546 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RetP35546 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.13■□□□□ 0.33
RetP35546 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RetP35546 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RetP35546 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RetP35546 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RetP35546 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RetP35546 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RetP35546 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RetP35546 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RetP35546 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.12■□□□□ 0.33
RetP35546 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RetP35546 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
RetP35546 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RetP35546 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
RetP35546 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RetP35546 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RetP35546 Mir6982-201ENSMUST00000184354 68 ntBASIC17.12■□□□□ 0.33
RetP35546 Trmt13-210ENSMUST00000198454 880 ntBASIC17.12■□□□□ 0.33
RetP35546 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RetP35546 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RetP35546 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RetP35546 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RetP35546 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RetP35546 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RetP35546 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RetP35546 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RetP35546 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RetP35546 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RetP35546 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RetP35546 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RetP35546 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RetP35546 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RetP35546 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RetP35546 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RetP35546 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RetP35546 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.11■□□□□ 0.33
RetP35546 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.11■□□□□ 0.33
RetP35546 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
RetP35546 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RetP35546 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RetP35546 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RetP35546 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RetP35546 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RetP35546 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.1■□□□□ 0.33
RetP35546 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RetP35546 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RetP35546 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.1■□□□□ 0.33
RetP35546 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.1■□□□□ 0.33
RetP35546 Gm13534-201ENSMUST00000121169 513 ntBASIC17.1■□□□□ 0.33
RetP35546 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
RetP35546 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RetP35546 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.1■□□□□ 0.33
RetP35546 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.1■□□□□ 0.33
RetP35546 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RetP35546 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.1■□□□□ 0.33
RetP35546 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RetP35546 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RetP35546 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RetP35546 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RetP35546 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RetP35546 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RetP35546 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RetP35546 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
RetP35546 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RetP35546 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RetP35546 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RetP35546 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RetP35546 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
RetP35546 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RetP35546 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RetP35546 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RetP35546 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RetP35546 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RetP35546 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RetP35546 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RetP35546 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RetP35546 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RetP35546 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
RetP35546 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RetP35546 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RetP35546 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
RetP35546 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RetP35546 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RetP35546 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RetP35546 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RetP35546 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RetP35546 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RetP35546 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
RetP35546 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
RetP35546 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RetP35546 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RetP35546 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms