Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Nedd8P29595 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nedd8P29595 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nedd8P29595 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Nedd8P29595 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nedd8P29595 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nedd8P29595 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nedd8P29595 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Nedd8P29595 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nedd8P29595 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nedd8P29595 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nedd8P29595 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nedd8P29595 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nedd8P29595 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nedd8P29595 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nedd8P29595 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Nedd8P29595 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC16.98■□□□□ 0.31
Nedd8P29595 Gm45444-201ENSMUST00000211394 898 ntBASIC16.98■□□□□ 0.31
Nedd8P29595 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nedd8P29595 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nedd8P29595 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
Nedd8P29595 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nedd8P29595 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nedd8P29595 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC16.98■□□□□ 0.31
Nedd8P29595 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Nedd8P29595 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nedd8P29595 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nedd8P29595 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Nedd8P29595 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Nedd8P29595 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nedd8P29595 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nedd8P29595 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Nedd8P29595 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.97■□□□□ 0.31
Nedd8P29595 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Nedd8P29595 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nedd8P29595 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nedd8P29595 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nedd8P29595 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Nedd8P29595 Gm27045-201ENSMUST00000182145 1402 ntBASIC16.96■□□□□ 0.31
Nedd8P29595 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC16.96■□□□□ 0.31
Nedd8P29595 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nedd8P29595 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nedd8P29595 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.96■□□□□ 0.31
Nedd8P29595 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC16.96■□□□□ 0.31
Nedd8P29595 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Nedd8P29595 Gm10657-201ENSMUST00000193528 1031 ntBASIC16.96■□□□□ 0.31
Nedd8P29595 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
Nedd8P29595 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
Nedd8P29595 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nedd8P29595 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nedd8P29595 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Nedd8P29595 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nedd8P29595 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Nedd8P29595 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Nedd8P29595 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Nedd8P29595 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Nedd8P29595 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Nedd8P29595 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nedd8P29595 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nedd8P29595 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC16.95■□□□□ 0.3
Nedd8P29595 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC16.95■□□□□ 0.3
Nedd8P29595 Gm12366-201ENSMUST00000121722 873 ntBASIC16.95■□□□□ 0.3
Nedd8P29595 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC16.95■□□□□ 0.3
Nedd8P29595 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC16.95■□□□□ 0.3
Nedd8P29595 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nedd8P29595 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Nedd8P29595 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nedd8P29595 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC16.95■□□□□ 0.3
Nedd8P29595 Gm5786-201ENSMUST00000085368 882 ntBASIC16.95■□□□□ 0.3
Nedd8P29595 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC16.95■□□□□ 0.3
Nedd8P29595 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nedd8P29595 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nedd8P29595 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Nedd8P29595 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nedd8P29595 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Nedd8P29595 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Nedd8P29595 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nedd8P29595 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nedd8P29595 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
Nedd8P29595 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
Nedd8P29595 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nedd8P29595 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.94■□□□□ 0.3
Nedd8P29595 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nedd8P29595 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nedd8P29595 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Nedd8P29595 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nedd8P29595 Gm5067-201ENSMUST00000170449 1009 ntBASIC16.94■□□□□ 0.3
Nedd8P29595 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC16.94■□□□□ 0.3
Nedd8P29595 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC16.94■□□□□ 0.3
Nedd8P29595 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nedd8P29595 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nedd8P29595 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.94■□□□□ 0.3
Nedd8P29595 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Nedd8P29595 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nedd8P29595 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nedd8P29595 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nedd8P29595 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.94■□□□□ 0.3
Nedd8P29595 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nedd8P29595 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Nedd8P29595 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms