Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Vcam1P29533 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.99
Vcam1P29533 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Vcam1P29533 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Vcam1P29533 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Vcam1P29533 Gm29994-201ENSMUST00000195495 1193 ntBASIC21.2■□□□□ 0.98
Vcam1P29533 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Vcam1P29533 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Vcam1P29533 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
Vcam1P29533 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Vcam1P29533 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC21.19■□□□□ 0.98
Vcam1P29533 Gm37292-201ENSMUST00000192062 758 ntBASIC21.19■□□□□ 0.98
Vcam1P29533 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC21.19■□□□□ 0.98
Vcam1P29533 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC21.19■□□□□ 0.98
Vcam1P29533 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Vcam1P29533 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Vcam1P29533 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Vcam1P29533 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Vcam1P29533 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Vcam1P29533 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Vcam1P29533 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
Vcam1P29533 BC021767-201ENSMUST00000126387 1716 ntBASIC21.18■□□□□ 0.98
Vcam1P29533 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Vcam1P29533 Gm20472-201ENSMUST00000174403 1240 ntBASIC21.18■□□□□ 0.98
Vcam1P29533 AC135963.1-201ENSMUST00000211640 717 ntBASIC21.18■□□□□ 0.98
Vcam1P29533 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Vcam1P29533 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Vcam1P29533 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Vcam1P29533 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Vcam1P29533 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Vcam1P29533 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Vcam1P29533 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Vcam1P29533 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Vcam1P29533 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Vcam1P29533 Gm13836-201ENSMUST00000121159 501 ntBASIC21.17■□□□□ 0.98
Vcam1P29533 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Vcam1P29533 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
Vcam1P29533 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Vcam1P29533 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Vcam1P29533 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Vcam1P29533 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Vcam1P29533 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Vcam1P29533 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Vcam1P29533 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Vcam1P29533 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC21.17■□□□□ 0.98
Vcam1P29533 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Vcam1P29533 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Vcam1P29533 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Vcam1P29533 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Vcam1P29533 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
Vcam1P29533 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Vcam1P29533 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vcam1P29533 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vcam1P29533 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC21.16■□□□□ 0.98
Vcam1P29533 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC21.16■□□□□ 0.98
Vcam1P29533 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Vcam1P29533 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC21.16■□□□□ 0.98
Vcam1P29533 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Vcam1P29533 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vcam1P29533 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vcam1P29533 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vcam1P29533 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vcam1P29533 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vcam1P29533 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Vcam1P29533 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Vcam1P29533 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Vcam1P29533 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Vcam1P29533 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Vcam1P29533 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Vcam1P29533 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Vcam1P29533 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Vcam1P29533 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC21.15■□□□□ 0.98
Vcam1P29533 Mir6349-201ENSMUST00000184059 97 ntBASIC21.15■□□□□ 0.98
Vcam1P29533 Gm7977-201ENSMUST00000193787 748 ntBASIC21.15■□□□□ 0.98
Vcam1P29533 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Vcam1P29533 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Vcam1P29533 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Vcam1P29533 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Vcam1P29533 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Vcam1P29533 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Vcam1P29533 Gm16042-201ENSMUST00000204813 1247 ntBASIC21.14■□□□□ 0.97
Vcam1P29533 Gm9885-202ENSMUST00000186234 2209 ntBASIC21.14■□□□□ 0.97
Vcam1P29533 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Vcam1P29533 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Vcam1P29533 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Vcam1P29533 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Vcam1P29533 Gm21814-202ENSMUST00000203277 873 ntBASIC21.13■□□□□ 0.97
Vcam1P29533 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Vcam1P29533 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Vcam1P29533 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
Vcam1P29533 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Vcam1P29533 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Vcam1P29533 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Vcam1P29533 AC124581.1-201ENSMUST00000225416 1399 ntBASIC21.12■□□□□ 0.97
Vcam1P29533 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Vcam1P29533 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vcam1P29533 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC21.12■□□□□ 0.97
Vcam1P29533 Gm10654-201ENSMUST00000098653 1633 ntBASIC21.12■□□□□ 0.97
Vcam1P29533 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vcam1P29533 Gm5417-201ENSMUST00000079706 384 ntBASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms