Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pde6bP23440 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Pde6bP23440 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pde6bP23440 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Pde6bP23440 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pde6bP23440 Gm10698-201ENSMUST00000182663 604 ntBASIC19.9■□□□□ 0.78
Pde6bP23440 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC19.9■□□□□ 0.78
Pde6bP23440 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Pde6bP23440 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pde6bP23440 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Pde6bP23440 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pde6bP23440 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pde6bP23440 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pde6bP23440 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Pde6bP23440 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pde6bP23440 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
Pde6bP23440 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Pde6bP23440 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Pde6bP23440 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Pde6bP23440 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pde6bP23440 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Pde6bP23440 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Pde6bP23440 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Pde6bP23440 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Pde6bP23440 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pde6bP23440 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.88■□□□□ 0.77
Pde6bP23440 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.88■□□□□ 0.77
Pde6bP23440 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pde6bP23440 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pde6bP23440 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pde6bP23440 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.88■□□□□ 0.77
Pde6bP23440 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Pde6bP23440 AC153881.1-201ENSMUST00000214448 284 ntBASIC19.88■□□□□ 0.77
Pde6bP23440 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pde6bP23440 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Pde6bP23440 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Pde6bP23440 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Pde6bP23440 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pde6bP23440 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pde6bP23440 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.87■□□□□ 0.77
Pde6bP23440 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Pde6bP23440 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pde6bP23440 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pde6bP23440 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pde6bP23440 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pde6bP23440 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Pde6bP23440 Gm715-201ENSMUST00000117865 831 ntBASIC19.87■□□□□ 0.77
Pde6bP23440 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC19.87■□□□□ 0.77
Pde6bP23440 Gm22325-201ENSMUST00000158904 308 ntBASIC19.87■□□□□ 0.77
Pde6bP23440 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pde6bP23440 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pde6bP23440 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pde6bP23440 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.87■□□□□ 0.77
Pde6bP23440 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pde6bP23440 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.87■□□□□ 0.77
Pde6bP23440 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Pde6bP23440 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pde6bP23440 Flg-201ENSMUST00000050758 1488 ntBASIC19.86■□□□□ 0.77
Pde6bP23440 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Pde6bP23440 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pde6bP23440 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pde6bP23440 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pde6bP23440 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pde6bP23440 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC19.86■□□□□ 0.77
Pde6bP23440 AL672049.1-201ENSMUST00000197943 91 ntBASIC19.86■□□□□ 0.77
Pde6bP23440 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pde6bP23440 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pde6bP23440 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.86■□□□□ 0.77
Pde6bP23440 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pde6bP23440 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pde6bP23440 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pde6bP23440 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pde6bP23440 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pde6bP23440 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Pde6bP23440 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pde6bP23440 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pde6bP23440 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pde6bP23440 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pde6bP23440 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Pde6bP23440 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Pde6bP23440 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.85■□□□□ 0.77
Pde6bP23440 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.85■□□□□ 0.77
Pde6bP23440 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pde6bP23440 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pde6bP23440 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pde6bP23440 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pde6bP23440 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Pde6bP23440 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Pde6bP23440 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pde6bP23440 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pde6bP23440 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Pde6bP23440 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Pde6bP23440 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pde6bP23440 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Pde6bP23440 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.84■□□□□ 0.77
Pde6bP23440 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.84■□□□□ 0.77
Pde6bP23440 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC19.84■□□□□ 0.77
Pde6bP23440 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.84■□□□□ 0.77
Pde6bP23440 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Pde6bP23440 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms