Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
BdnfP21237 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
BdnfP21237 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.51■□□□□ 0.39
BdnfP21237 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
BdnfP21237 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
BdnfP21237 Gm43060-201ENSMUST00000200621 289 ntBASIC17.51■□□□□ 0.39
BdnfP21237 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BdnfP21237 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BdnfP21237 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BdnfP21237 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BdnfP21237 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BdnfP21237 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BdnfP21237 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
BdnfP21237 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
BdnfP21237 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
BdnfP21237 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BdnfP21237 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BdnfP21237 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
BdnfP21237 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
BdnfP21237 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
BdnfP21237 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BdnfP21237 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
BdnfP21237 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.5■□□□□ 0.39
BdnfP21237 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
BdnfP21237 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.5■□□□□ 0.39
BdnfP21237 Gm38205-201ENSMUST00000192243 258 ntBASIC17.5■□□□□ 0.39
BdnfP21237 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
BdnfP21237 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BdnfP21237 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.5■□□□□ 0.39
BdnfP21237 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
BdnfP21237 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BdnfP21237 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BdnfP21237 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
BdnfP21237 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
BdnfP21237 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
BdnfP21237 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
BdnfP21237 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
BdnfP21237 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
BdnfP21237 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
BdnfP21237 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
BdnfP21237 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
BdnfP21237 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
BdnfP21237 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC17.49■□□□□ 0.39
BdnfP21237 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
BdnfP21237 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
BdnfP21237 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
BdnfP21237 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
BdnfP21237 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
BdnfP21237 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
BdnfP21237 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.48■□□□□ 0.39
BdnfP21237 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
BdnfP21237 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
BdnfP21237 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
BdnfP21237 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
BdnfP21237 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
BdnfP21237 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
BdnfP21237 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.48■□□□□ 0.39
BdnfP21237 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.48■□□□□ 0.39
BdnfP21237 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
BdnfP21237 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
BdnfP21237 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
BdnfP21237 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.47■□□□□ 0.39
BdnfP21237 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
BdnfP21237 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
BdnfP21237 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
BdnfP21237 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.47■□□□□ 0.39
BdnfP21237 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
BdnfP21237 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.47■□□□□ 0.39
BdnfP21237 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
BdnfP21237 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
BdnfP21237 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
BdnfP21237 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
BdnfP21237 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
BdnfP21237 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
BdnfP21237 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
BdnfP21237 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
BdnfP21237 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
BdnfP21237 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
BdnfP21237 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
BdnfP21237 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.46■□□□□ 0.39
BdnfP21237 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
BdnfP21237 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BdnfP21237 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
BdnfP21237 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
BdnfP21237 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
BdnfP21237 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BdnfP21237 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
BdnfP21237 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.46■□□□□ 0.39
BdnfP21237 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
BdnfP21237 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
BdnfP21237 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.46■□□□□ 0.39
BdnfP21237 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
BdnfP21237 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BdnfP21237 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
BdnfP21237 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
BdnfP21237 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BdnfP21237 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BdnfP21237 Haglr-201ENSMUST00000100000 2085 ntBASIC17.45■□□□□ 0.38
BdnfP21237 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
BdnfP21237 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms