Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Tnfrsf9P20334 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfrsf9P20334 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Tnfrsf9P20334 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfrsf9P20334 Gm43909-201ENSMUST00000203443 1876 ntBASIC14.84□□□□□ -0.03
Tnfrsf9P20334 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfrsf9P20334 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfrsf9P20334 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfrsf9P20334 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfrsf9P20334 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfrsf9P20334 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC14.84□□□□□ -0.03
Tnfrsf9P20334 Gm12896-201ENSMUST00000118430 226 ntBASIC14.84□□□□□ -0.03
Tnfrsf9P20334 Gm26524-201ENSMUST00000192339 390 ntBASIC14.84□□□□□ -0.03
Tnfrsf9P20334 AL672049.1-201ENSMUST00000197943 91 ntBASIC14.84□□□□□ -0.03
Tnfrsf9P20334 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfrsf9P20334 Rab3c-203ENSMUST00000224180 967 ntBASIC14.84□□□□□ -0.03
Tnfrsf9P20334 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Tnfrsf9P20334 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC14.84□□□□□ -0.03
Tnfrsf9P20334 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfrsf9P20334 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfrsf9P20334 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfrsf9P20334 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
Tnfrsf9P20334 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfrsf9P20334 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC14.84□□□□□ -0.03
Tnfrsf9P20334 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Tnfrsf9P20334 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tnfrsf9P20334 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Tnfrsf9P20334 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tnfrsf9P20334 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tnfrsf9P20334 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Tnfrsf9P20334 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tnfrsf9P20334 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tnfrsf9P20334 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tnfrsf9P20334 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Tnfrsf9P20334 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tnfrsf9P20334 Hsf1-204ENSMUST00000226872 2104 ntBASIC14.83□□□□□ -0.04
Tnfrsf9P20334 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC14.83□□□□□ -0.04
Tnfrsf9P20334 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tnfrsf9P20334 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tnfrsf9P20334 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tnfrsf9P20334 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Tnfrsf9P20334 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tnfrsf9P20334 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tnfrsf9P20334 Gm37563-201ENSMUST00000192580 1513 ntBASIC14.82□□□□□ -0.04
Tnfrsf9P20334 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tnfrsf9P20334 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tnfrsf9P20334 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tnfrsf9P20334 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Tnfrsf9P20334 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tnfrsf9P20334 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tnfrsf9P20334 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Tnfrsf9P20334 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Tnfrsf9P20334 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tnfrsf9P20334 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tnfrsf9P20334 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tnfrsf9P20334 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Tnfrsf9P20334 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tnfrsf9P20334 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Tnfrsf9P20334 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tnfrsf9P20334 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC14.82□□□□□ -0.04
Tnfrsf9P20334 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Tnfrsf9P20334 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tnfrsf9P20334 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
Tnfrsf9P20334 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Tnfrsf9P20334 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tnfrsf9P20334 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tnfrsf9P20334 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Tnfrsf9P20334 Gm6576-201ENSMUST00000169678 883 ntBASIC14.81□□□□□ -0.04
Tnfrsf9P20334 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Tnfrsf9P20334 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC14.81□□□□□ -0.04
Tnfrsf9P20334 Gm29994-201ENSMUST00000195495 1193 ntBASIC14.81□□□□□ -0.04
Tnfrsf9P20334 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC14.81□□□□□ -0.04
Tnfrsf9P20334 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Tnfrsf9P20334 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC14.81□□□□□ -0.04
Tnfrsf9P20334 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC14.81□□□□□ -0.04
Tnfrsf9P20334 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tnfrsf9P20334 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tnfrsf9P20334 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Tnfrsf9P20334 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tnfrsf9P20334 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tnfrsf9P20334 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tnfrsf9P20334 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tnfrsf9P20334 Grk6-206ENSMUST00000224995 2971 ntBASIC14.8□□□□□ -0.04
Tnfrsf9P20334 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tnfrsf9P20334 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tnfrsf9P20334 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Tnfrsf9P20334 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC14.8□□□□□ -0.04
Tnfrsf9P20334 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tnfrsf9P20334 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC14.8□□□□□ -0.04
Tnfrsf9P20334 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Tnfrsf9P20334 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tnfrsf9P20334 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Tnfrsf9P20334 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Tnfrsf9P20334 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tnfrsf9P20334 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Tnfrsf9P20334 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tnfrsf9P20334 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC14.8□□□□□ -0.04
Tnfrsf9P20334 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tnfrsf9P20334 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC14.8□□□□□ -0.04
Tnfrsf9P20334 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms