Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.78■□□□□ 0.28
Hmgn1P18608 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hmgn1P18608 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.78■□□□□ 0.28
Hmgn1P18608 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hmgn1P18608 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hmgn1P18608 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Hmgn1P18608 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Hmgn1P18608 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Hmgn1P18608 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Hmgn1P18608 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hmgn1P18608 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hmgn1P18608 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hmgn1P18608 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hmgn1P18608 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hmgn1P18608 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hmgn1P18608 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Hmgn1P18608 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.77■□□□□ 0.28
Hmgn1P18608 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Hmgn1P18608 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Hmgn1P18608 Gm8969-201ENSMUST00000199694 526 ntBASIC16.77■□□□□ 0.28
Hmgn1P18608 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC16.77■□□□□ 0.28
Hmgn1P18608 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Hmgn1P18608 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC16.77■□□□□ 0.28
Hmgn1P18608 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hmgn1P18608 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Hmgn1P18608 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Hmgn1P18608 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Hmgn1P18608 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Hmgn1P18608 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Hmgn1P18608 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.77■□□□□ 0.27
Hmgn1P18608 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Hmgn1P18608 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Hmgn1P18608 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Hmgn1P18608 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Hmgn1P18608 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Hmgn1P18608 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hmgn1P18608 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Hmgn1P18608 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Hmgn1P18608 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Hmgn1P18608 Gm19094-201ENSMUST00000209791 1246 ntBASIC16.76■□□□□ 0.27
Hmgn1P18608 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hmgn1P18608 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Hmgn1P18608 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Hmgn1P18608 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hmgn1P18608 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
Hmgn1P18608 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.76■□□□□ 0.27
Hmgn1P18608 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Hmgn1P18608 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Hmgn1P18608 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.75■□□□□ 0.27
Hmgn1P18608 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Hmgn1P18608 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hmgn1P18608 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hmgn1P18608 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Hmgn1P18608 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Hmgn1P18608 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC16.75■□□□□ 0.27
Hmgn1P18608 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC16.75■□□□□ 0.27
Hmgn1P18608 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Hmgn1P18608 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hmgn1P18608 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hmgn1P18608 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hmgn1P18608 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hmgn1P18608 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Hmgn1P18608 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Hmgn1P18608 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hmgn1P18608 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.75■□□□□ 0.27
Hmgn1P18608 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.75■□□□□ 0.27
Hmgn1P18608 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hmgn1P18608 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hmgn1P18608 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hmgn1P18608 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hmgn1P18608 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.74■□□□□ 0.27
Hmgn1P18608 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Hmgn1P18608 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC16.74■□□□□ 0.27
Hmgn1P18608 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hmgn1P18608 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.74■□□□□ 0.27
Hmgn1P18608 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Hmgn1P18608 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.73■□□□□ 0.27
Hmgn1P18608 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hmgn1P18608 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hmgn1P18608 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hmgn1P18608 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hmgn1P18608 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hmgn1P18608 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Hmgn1P18608 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC16.73■□□□□ 0.27
Hmgn1P18608 Wdr70-203ENSMUST00000227371 1130 ntBASIC16.73■□□□□ 0.27
Hmgn1P18608 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.73■□□□□ 0.27
Hmgn1P18608 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hmgn1P18608 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Hmgn1P18608 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hmgn1P18608 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.73■□□□□ 0.27
Hmgn1P18608 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hmgn1P18608 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.73■□□□□ 0.27
Hmgn1P18608 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.73■□□□□ 0.27
Hmgn1P18608 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hmgn1P18608 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hmgn1P18608 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hmgn1P18608 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Hmgn1P18608 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Hmgn1P18608 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Hmgn1P18608 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms