Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Ccl1P10146 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccl1P10146 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Ccl1P10146 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccl1P10146 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ccl1P10146 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccl1P10146 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccl1P10146 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccl1P10146 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ccl1P10146 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccl1P10146 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
Ccl1P10146 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC14.26□□□□□ -0.13
Ccl1P10146 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Ccl1P10146 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ccl1P10146 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccl1P10146 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccl1P10146 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ccl1P10146 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC14.26□□□□□ -0.13
Ccl1P10146 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Ccl1P10146 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccl1P10146 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccl1P10146 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC14.26□□□□□ -0.13
Ccl1P10146 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccl1P10146 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccl1P10146 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccl1P10146 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ccl1P10146 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccl1P10146 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccl1P10146 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccl1P10146 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccl1P10146 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccl1P10146 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccl1P10146 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccl1P10146 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccl1P10146 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccl1P10146 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccl1P10146 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccl1P10146 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccl1P10146 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccl1P10146 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccl1P10146 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC14.25□□□□□ -0.13
Ccl1P10146 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Ccl1P10146 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccl1P10146 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC14.25□□□□□ -0.13
Ccl1P10146 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Ccl1P10146 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC14.25□□□□□ -0.13
Ccl1P10146 Serp2-204ENSMUST00000228055 705 ntBASIC14.25□□□□□ -0.13
Ccl1P10146 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccl1P10146 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccl1P10146 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccl1P10146 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccl1P10146 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccl1P10146 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccl1P10146 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccl1P10146 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ccl1P10146 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccl1P10146 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccl1P10146 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccl1P10146 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccl1P10146 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccl1P10146 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccl1P10146 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccl1P10146 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccl1P10146 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccl1P10146 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccl1P10146 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccl1P10146 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccl1P10146 AC121598.2-201ENSMUST00000228376 2325 ntBASIC14.24□□□□□ -0.13
Ccl1P10146 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ccl1P10146 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ccl1P10146 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccl1P10146 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC14.23□□□□□ -0.13
Ccl1P10146 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Ccl1P10146 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccl1P10146 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccl1P10146 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccl1P10146 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccl1P10146 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccl1P10146 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Ccl1P10146 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccl1P10146 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccl1P10146 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccl1P10146 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccl1P10146 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Ccl1P10146 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccl1P10146 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccl1P10146 Gm43548-201ENSMUST00000197139 2353 ntBASIC14.23□□□□□ -0.13
Ccl1P10146 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Ccl1P10146 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccl1P10146 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Ccl1P10146 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccl1P10146 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC14.22□□□□□ -0.13
Ccl1P10146 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.22□□□□□ -0.13
Ccl1P10146 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ccl1P10146 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ccl1P10146 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccl1P10146 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccl1P10146 Gm5921-201ENSMUST00000075898 882 ntBASIC14.22□□□□□ -0.13
Ccl1P10146 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Ccl1P10146 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms