Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ApoeP08226 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ApoeP08226 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ApoeP08226 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ApoeP08226 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
ApoeP08226 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
ApoeP08226 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ApoeP08226 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ApoeP08226 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ApoeP08226 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ApoeP08226 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ApoeP08226 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ApoeP08226 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ApoeP08226 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ApoeP08226 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ApoeP08226 Gm14117-201ENSMUST00000122417 843 ntBASIC17.32■□□□□ 0.36
ApoeP08226 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ApoeP08226 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC17.32■□□□□ 0.36
ApoeP08226 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
ApoeP08226 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ApoeP08226 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
ApoeP08226 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.31■□□□□ 0.36
ApoeP08226 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ApoeP08226 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ApoeP08226 Gm27801-201ENSMUST00000184174 223 ntBASIC17.31■□□□□ 0.36
ApoeP08226 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.31■□□□□ 0.36
ApoeP08226 Gm8969-201ENSMUST00000199694 526 ntBASIC17.31■□□□□ 0.36
ApoeP08226 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ApoeP08226 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ApoeP08226 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.31■□□□□ 0.36
ApoeP08226 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ApoeP08226 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ApoeP08226 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ApoeP08226 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ApoeP08226 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ApoeP08226 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ApoeP08226 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC17.3■□□□□ 0.36
ApoeP08226 Gm12251-201ENSMUST00000117893 792 ntBASIC17.3■□□□□ 0.36
ApoeP08226 Gm11421-201ENSMUST00000122124 294 ntBASIC17.3■□□□□ 0.36
ApoeP08226 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.3■□□□□ 0.36
ApoeP08226 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ApoeP08226 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ApoeP08226 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ApoeP08226 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ApoeP08226 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
ApoeP08226 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ApoeP08226 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ApoeP08226 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
ApoeP08226 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ApoeP08226 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.3■□□□□ 0.36
ApoeP08226 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ApoeP08226 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ApoeP08226 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ApoeP08226 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ApoeP08226 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.29■□□□□ 0.36
ApoeP08226 Flvcr1-202ENSMUST00000191946 1216 ntBASIC17.29■□□□□ 0.36
ApoeP08226 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.29■□□□□ 0.36
ApoeP08226 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ApoeP08226 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ApoeP08226 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ApoeP08226 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ApoeP08226 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ApoeP08226 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ApoeP08226 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ApoeP08226 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.29■□□□□ 0.36
ApoeP08226 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ApoeP08226 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ApoeP08226 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
ApoeP08226 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ApoeP08226 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ApoeP08226 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ApoeP08226 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ApoeP08226 Gm43137-201ENSMUST00000198052 594 ntBASIC17.28■□□□□ 0.36
ApoeP08226 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ApoeP08226 Rps24-207ENSMUST00000224568 714 ntBASIC17.28■□□□□ 0.36
ApoeP08226 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ApoeP08226 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ApoeP08226 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.28■□□□□ 0.36
ApoeP08226 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ApoeP08226 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ApoeP08226 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ApoeP08226 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ApoeP08226 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
ApoeP08226 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
ApoeP08226 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ApoeP08226 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
ApoeP08226 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ApoeP08226 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ApoeP08226 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
ApoeP08226 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ApoeP08226 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ApoeP08226 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ApoeP08226 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
ApoeP08226 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
ApoeP08226 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.27■□□□□ 0.36
ApoeP08226 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ApoeP08226 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
ApoeP08226 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ApoeP08226 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
ApoeP08226 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms