Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
P06344 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
P06344 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
P06344 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
P06344 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
P06344 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
P06344 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
P06344 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
P06344 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
P06344 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
P06344 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
P06344 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
P06344 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC16.33■□□□□ 0.2
P06344 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
P06344 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.33■□□□□ 0.2
P06344 Grk6-206ENSMUST00000224995 2971 ntBASIC16.33■□□□□ 0.2
P06344 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
P06344 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
P06344 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.33■□□□□ 0.2
P06344 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
P06344 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
P06344 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
P06344 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
P06344 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
P06344 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
P06344 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
P06344 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
P06344 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
P06344 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
P06344 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
P06344 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
P06344 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
P06344 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
P06344 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
P06344 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
P06344 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
P06344 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
P06344 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
P06344 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
P06344 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
P06344 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
P06344 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
P06344 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
P06344 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.3■□□□□ 0.2
P06344 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.3■□□□□ 0.2
P06344 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
P06344 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
P06344 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
P06344 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
P06344 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC16.3■□□□□ 0.2
P06344 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
P06344 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC16.3■□□□□ 0.2
P06344 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
P06344 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
P06344 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.3■□□□□ 0.2
P06344 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
P06344 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
P06344 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.3■□□□□ 0.2
P06344 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
P06344 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.3■□□□□ 0.2
P06344 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.3■□□□□ 0.2
P06344 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
P06344 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
P06344 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
P06344 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
P06344 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
P06344 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
P06344 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
P06344 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
P06344 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
P06344 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
P06344 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
P06344 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
P06344 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
P06344 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
P06344 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
P06344 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
P06344 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
P06344 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
P06344 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
P06344 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
P06344 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
P06344 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
P06344 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
P06344 Gm44549-201ENSMUST00000208351 577 ntBASIC16.28■□□□□ 0.2
P06344 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.28■□□□□ 0.2
P06344 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
P06344 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
P06344 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.28■□□□□ 0.2
P06344 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.28■□□□□ 0.2
P06344 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.28■□□□□ 0.2
P06344 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
P06344 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
P06344 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
P06344 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
P06344 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
P06344 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.28■□□□□ 0.2
P06344 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
P06344 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
P06344 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms