Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CfdP03953 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CfdP03953 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CfdP03953 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CfdP03953 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CfdP03953 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CfdP03953 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CfdP03953 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CfdP03953 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CfdP03953 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CfdP03953 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC15.3■□□□□ 0.04
CfdP03953 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CfdP03953 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CfdP03953 Gm8969-201ENSMUST00000199694 526 ntBASIC15.3■□□□□ 0.04
CfdP03953 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CfdP03953 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CfdP03953 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CfdP03953 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CfdP03953 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CfdP03953 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CfdP03953 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CfdP03953 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CfdP03953 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CfdP03953 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CfdP03953 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CfdP03953 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CfdP03953 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CfdP03953 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CfdP03953 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CfdP03953 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CfdP03953 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CfdP03953 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CfdP03953 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CfdP03953 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CfdP03953 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CfdP03953 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CfdP03953 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CfdP03953 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CfdP03953 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CfdP03953 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CfdP03953 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CfdP03953 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CfdP03953 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CfdP03953 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC15.28■□□□□ 0.04
CfdP03953 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CfdP03953 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC15.28■□□□□ 0.04
CfdP03953 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CfdP03953 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
CfdP03953 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CfdP03953 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC15.28■□□□□ 0.04
CfdP03953 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CfdP03953 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CfdP03953 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CfdP03953 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CfdP03953 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CfdP03953 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CfdP03953 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CfdP03953 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CfdP03953 Gm5522-201ENSMUST00000189483 1242 ntBASIC15.27■□□□□ 0.04
CfdP03953 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC15.27■□□□□ 0.04
CfdP03953 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
CfdP03953 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC15.27■□□□□ 0.03
CfdP03953 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
CfdP03953 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
CfdP03953 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CfdP03953 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CfdP03953 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CfdP03953 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
CfdP03953 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CfdP03953 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CfdP03953 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CfdP03953 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CfdP03953 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CfdP03953 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CfdP03953 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CfdP03953 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CfdP03953 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CfdP03953 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CfdP03953 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CfdP03953 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC15.26■□□□□ 0.03
CfdP03953 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CfdP03953 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CfdP03953 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CfdP03953 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CfdP03953 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CfdP03953 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CfdP03953 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CfdP03953 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CfdP03953 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
CfdP03953 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CfdP03953 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CfdP03953 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CfdP03953 Gm37805-201ENSMUST00000192612 1094 ntBASIC15.25■□□□□ 0.03
CfdP03953 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CfdP03953 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CfdP03953 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CfdP03953 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CfdP03953 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CfdP03953 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CfdP03953 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms