Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
P01852 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
P01852 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
P01852 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
P01852 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
P01852 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
P01852 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
P01852 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
P01852 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
P01852 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC16.71■□□□□ 0.27
P01852 Gm5408-201ENSMUST00000197998 747 ntBASIC16.71■□□□□ 0.27
P01852 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
P01852 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
P01852 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
P01852 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
P01852 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
P01852 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
P01852 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
P01852 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
P01852 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
P01852 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
P01852 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
P01852 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
P01852 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.7■□□□□ 0.26
P01852 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
P01852 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
P01852 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
P01852 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
P01852 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
P01852 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
P01852 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC16.7■□□□□ 0.26
P01852 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
P01852 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
P01852 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
P01852 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
P01852 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
P01852 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
P01852 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.7■□□□□ 0.26
P01852 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
P01852 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
P01852 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
P01852 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
P01852 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
P01852 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
P01852 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.69■□□□□ 0.26
P01852 Gm26524-201ENSMUST00000192339 390 ntBASIC16.69■□□□□ 0.26
P01852 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
P01852 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
P01852 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
P01852 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
P01852 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
P01852 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
P01852 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
P01852 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
P01852 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
P01852 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
P01852 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
P01852 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
P01852 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC16.68■□□□□ 0.26
P01852 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC16.68■□□□□ 0.26
P01852 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.68■□□□□ 0.26
P01852 Gm4968-201ENSMUST00000071458 858 ntBASIC16.68■□□□□ 0.26
P01852 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.68■□□□□ 0.26
P01852 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
P01852 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
P01852 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
P01852 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
P01852 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
P01852 Gm43672-201ENSMUST00000199072 1731 ntBASIC16.67■□□□□ 0.26
P01852 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
P01852 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
P01852 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC16.67■□□□□ 0.26
P01852 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
P01852 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16.67■□□□□ 0.26
P01852 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
P01852 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
P01852 CT025689.6-201ENSMUST00000224991 1104 ntBASIC16.67■□□□□ 0.26
P01852 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
P01852 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
P01852 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
P01852 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
P01852 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
P01852 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
P01852 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
P01852 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
P01852 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
P01852 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
P01852 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.66■□□□□ 0.26
P01852 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
P01852 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
P01852 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
P01852 Gm12441-201ENSMUST00000121806 588 ntBASIC16.66■□□□□ 0.26
P01852 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
P01852 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
P01852 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.66■□□□□ 0.26
P01852 Gm43859-201ENSMUST00000200075 1412 ntBASIC16.66■□□□□ 0.26
P01852 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.66■□□□□ 0.26
P01852 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.66■□□□□ 0.26
P01852 Rab3c-203ENSMUST00000224180 967 ntBASIC16.66■□□□□ 0.26
P01852 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms