Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vti1aO89116 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vti1aO89116 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
Vti1aO89116 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC19.75■□□□□ 0.75
Vti1aO89116 Arhgef33-211ENSMUST00000225658 473 ntBASIC19.75■□□□□ 0.75
Vti1aO89116 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vti1aO89116 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vti1aO89116 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vti1aO89116 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vti1aO89116 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Vti1aO89116 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Vti1aO89116 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vti1aO89116 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vti1aO89116 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.74■□□□□ 0.75
Vti1aO89116 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Vti1aO89116 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vti1aO89116 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vti1aO89116 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Vti1aO89116 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vti1aO89116 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vti1aO89116 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vti1aO89116 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Vti1aO89116 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Vti1aO89116 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vti1aO89116 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vti1aO89116 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vti1aO89116 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vti1aO89116 Gm5643-201ENSMUST00000117081 966 ntBASIC19.73■□□□□ 0.75
Vti1aO89116 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Vti1aO89116 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Vti1aO89116 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC19.73■□□□□ 0.75
Vti1aO89116 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC19.73■□□□□ 0.75
Vti1aO89116 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC19.73■□□□□ 0.75
Vti1aO89116 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vti1aO89116 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Vti1aO89116 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Vti1aO89116 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vti1aO89116 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vti1aO89116 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vti1aO89116 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vti1aO89116 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Vti1aO89116 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.72■□□□□ 0.75
Vti1aO89116 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Vti1aO89116 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vti1aO89116 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Vti1aO89116 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.72■□□□□ 0.75
Vti1aO89116 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Vti1aO89116 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.72■□□□□ 0.75
Vti1aO89116 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.72■□□□□ 0.75
Vti1aO89116 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vti1aO89116 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vti1aO89116 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC19.72■□□□□ 0.75
Vti1aO89116 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Vti1aO89116 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.72■□□□□ 0.75
Vti1aO89116 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Vti1aO89116 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Vti1aO89116 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vti1aO89116 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vti1aO89116 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vti1aO89116 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vti1aO89116 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vti1aO89116 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Vti1aO89116 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vti1aO89116 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC19.71■□□□□ 0.75
Vti1aO89116 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.71■□□□□ 0.75
Vti1aO89116 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vti1aO89116 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vti1aO89116 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Vti1aO89116 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Vti1aO89116 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vti1aO89116 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vti1aO89116 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vti1aO89116 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Vti1aO89116 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vti1aO89116 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vti1aO89116 Gm6576-201ENSMUST00000169678 883 ntBASIC19.7■□□□□ 0.74
Vti1aO89116 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.7■□□□□ 0.74
Vti1aO89116 AC158538.1-201ENSMUST00000225870 294 ntBASIC19.7■□□□□ 0.74
Vti1aO89116 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vti1aO89116 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vti1aO89116 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vti1aO89116 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vti1aO89116 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Vti1aO89116 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vti1aO89116 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.69■□□□□ 0.74
Vti1aO89116 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vti1aO89116 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vti1aO89116 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.69■□□□□ 0.74
Vti1aO89116 Golph3-205ENSMUST00000228671 2842 ntBASIC19.69■□□□□ 0.74
Vti1aO89116 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vti1aO89116 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.69■□□□□ 0.74
Vti1aO89116 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vti1aO89116 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vti1aO89116 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Vti1aO89116 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
Vti1aO89116 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vti1aO89116 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vti1aO89116 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vti1aO89116 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vti1aO89116 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms