Protein–RNA interactions for Protein: O89090

Sp1, Transcription factor Sp1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp1O89090 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sp1O89090 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.58■□□□□ 0.56
Sp1O89090 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sp1O89090 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sp1O89090 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Sp1O89090 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sp1O89090 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sp1O89090 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sp1O89090 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Sp1O89090 Gm13158-201ENSMUST00000122007 736 ntBASIC18.57■□□□□ 0.56
Sp1O89090 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.57■□□□□ 0.56
Sp1O89090 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sp1O89090 Mtag2-201ENSMUST00000058665 714 ntBASIC18.57■□□□□ 0.56
Sp1O89090 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sp1O89090 Gm10812-201ENSMUST00000099864 546 ntBASIC18.57■□□□□ 0.56
Sp1O89090 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sp1O89090 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.57■□□□□ 0.56
Sp1O89090 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Sp1O89090 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Sp1O89090 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Sp1O89090 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.56■□□□□ 0.56
Sp1O89090 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sp1O89090 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.56■□□□□ 0.56
Sp1O89090 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sp1O89090 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
Sp1O89090 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Sp1O89090 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Sp1O89090 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.56■□□□□ 0.56
Sp1O89090 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Sp1O89090 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.56■□□□□ 0.56
Sp1O89090 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sp1O89090 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sp1O89090 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.55■□□□□ 0.56
Sp1O89090 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sp1O89090 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sp1O89090 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sp1O89090 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Sp1O89090 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sp1O89090 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sp1O89090 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sp1O89090 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sp1O89090 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sp1O89090 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Sp1O89090 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sp1O89090 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Sp1O89090 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sp1O89090 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sp1O89090 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sp1O89090 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Sp1O89090 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.54■□□□□ 0.56
Sp1O89090 Gm38285-201ENSMUST00000192928 922 ntBASIC18.54■□□□□ 0.56
Sp1O89090 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.54■□□□□ 0.56
Sp1O89090 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sp1O89090 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sp1O89090 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sp1O89090 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sp1O89090 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.54■□□□□ 0.56
Sp1O89090 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.53■□□□□ 0.56
Sp1O89090 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sp1O89090 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sp1O89090 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sp1O89090 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sp1O89090 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sp1O89090 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.53■□□□□ 0.56
Sp1O89090 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.53■□□□□ 0.56
Sp1O89090 Gm10698-201ENSMUST00000182663 604 ntBASIC18.53■□□□□ 0.56
Sp1O89090 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.53■□□□□ 0.56
Sp1O89090 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.53■□□□□ 0.56
Sp1O89090 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sp1O89090 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sp1O89090 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Sp1O89090 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sp1O89090 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sp1O89090 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Sp1O89090 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Sp1O89090 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.52■□□□□ 0.56
Sp1O89090 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.52■□□□□ 0.56
Sp1O89090 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sp1O89090 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.52■□□□□ 0.55
Sp1O89090 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Sp1O89090 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Sp1O89090 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.52■□□□□ 0.55
Sp1O89090 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
Sp1O89090 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Sp1O89090 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sp1O89090 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.51■□□□□ 0.55
Sp1O89090 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sp1O89090 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.51■□□□□ 0.55
Sp1O89090 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sp1O89090 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Sp1O89090 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sp1O89090 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.51■□□□□ 0.55
Sp1O89090 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sp1O89090 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Sp1O89090 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Sp1O89090 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Sp1O89090 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sp1O89090 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Sp1O89090 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sp1O89090 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms