Protein–RNA interactions for Protein: O89029

Matn4, Matrilin-4, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn4O89029 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Matn4O89029 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Matn4O89029 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Matn4O89029 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.32■□□□□ 0.36
Matn4O89029 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Matn4O89029 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Matn4O89029 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.32■□□□□ 0.36
Matn4O89029 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.31■□□□□ 0.36
Matn4O89029 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.31■□□□□ 0.36
Matn4O89029 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Matn4O89029 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Matn4O89029 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Matn4O89029 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Matn4O89029 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Matn4O89029 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Matn4O89029 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.31■□□□□ 0.36
Matn4O89029 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.31■□□□□ 0.36
Matn4O89029 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Matn4O89029 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.31■□□□□ 0.36
Matn4O89029 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Matn4O89029 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Matn4O89029 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Matn4O89029 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Matn4O89029 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Matn4O89029 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Matn4O89029 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Matn4O89029 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.3■□□□□ 0.36
Matn4O89029 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Matn4O89029 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Matn4O89029 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.3■□□□□ 0.36
Matn4O89029 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Matn4O89029 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Matn4O89029 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Matn4O89029 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Matn4O89029 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Matn4O89029 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Matn4O89029 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Matn4O89029 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Matn4O89029 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Matn4O89029 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Matn4O89029 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Matn4O89029 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Matn4O89029 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Matn4O89029 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.29■□□□□ 0.36
Matn4O89029 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Matn4O89029 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Matn4O89029 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.29■□□□□ 0.36
Matn4O89029 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Matn4O89029 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Matn4O89029 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Matn4O89029 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Matn4O89029 Appbp2os-202ENSMUST00000206972 447 ntBASIC17.28■□□□□ 0.36
Matn4O89029 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Matn4O89029 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Matn4O89029 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Matn4O89029 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Matn4O89029 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.27■□□□□ 0.36
Matn4O89029 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Matn4O89029 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Matn4O89029 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
Matn4O89029 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Matn4O89029 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Matn4O89029 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Matn4O89029 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Matn4O89029 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Matn4O89029 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Matn4O89029 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Matn4O89029 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Matn4O89029 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.27■□□□□ 0.35
Matn4O89029 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Matn4O89029 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Matn4O89029 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Matn4O89029 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Matn4O89029 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Matn4O89029 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Matn4O89029 Gm13146-201ENSMUST00000118508 780 ntBASIC17.26■□□□□ 0.35
Matn4O89029 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC17.26■□□□□ 0.35
Matn4O89029 Gm8969-201ENSMUST00000199694 526 ntBASIC17.26■□□□□ 0.35
Matn4O89029 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Matn4O89029 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Matn4O89029 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Matn4O89029 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Matn4O89029 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Matn4O89029 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Matn4O89029 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Matn4O89029 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Matn4O89029 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Matn4O89029 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Matn4O89029 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Matn4O89029 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Matn4O89029 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
Matn4O89029 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Matn4O89029 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Matn4O89029 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Matn4O89029 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Matn4O89029 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Matn4O89029 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Matn4O89029 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Matn4O89029 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Matn4O89029 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms