Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Cops6O88545 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC22.46■■□□□ 1.19
Cops6O88545 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Cops6O88545 Gm18025-201ENSMUST00000221733 862 ntBASIC22.46■■□□□ 1.19
Cops6O88545 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC22.46■■□□□ 1.19
Cops6O88545 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
Cops6O88545 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Cops6O88545 Gm43545-201ENSMUST00000196765 2779 ntBASIC22.45■■□□□ 1.19
Cops6O88545 Gm13836-201ENSMUST00000121159 501 ntBASIC22.45■■□□□ 1.18
Cops6O88545 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC22.45■■□□□ 1.18
Cops6O88545 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC22.45■■□□□ 1.18
Cops6O88545 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
Cops6O88545 Gm29994-201ENSMUST00000195495 1193 ntBASIC22.45■■□□□ 1.18
Cops6O88545 Gm42545-201ENSMUST00000202755 922 ntBASIC22.45■■□□□ 1.18
Cops6O88545 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC22.45■■□□□ 1.18
Cops6O88545 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Cops6O88545 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Cops6O88545 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC22.45■■□□□ 1.18
Cops6O88545 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC22.45■■□□□ 1.18
Cops6O88545 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Cops6O88545 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Cops6O88545 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Cops6O88545 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
Cops6O88545 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Cops6O88545 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Cops6O88545 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Cops6O88545 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Cops6O88545 Gm7977-201ENSMUST00000193787 748 ntBASIC22.44■■□□□ 1.18
Cops6O88545 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Cops6O88545 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
Cops6O88545 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Cops6O88545 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Cops6O88545 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC22.44■■□□□ 1.18
Cops6O88545 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC22.43■■□□□ 1.18
Cops6O88545 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Cops6O88545 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Cops6O88545 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC22.43■■□□□ 1.18
Cops6O88545 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC22.43■■□□□ 1.18
Cops6O88545 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Cops6O88545 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Cops6O88545 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
Cops6O88545 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
Cops6O88545 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC22.43■■□□□ 1.18
Cops6O88545 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Cops6O88545 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Cops6O88545 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Cops6O88545 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Cops6O88545 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
Cops6O88545 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC22.42■■□□□ 1.18
Cops6O88545 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
Cops6O88545 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Cops6O88545 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Cops6O88545 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Cops6O88545 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Cops6O88545 Gm20472-201ENSMUST00000174403 1240 ntBASIC22.42■■□□□ 1.18
Cops6O88545 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Cops6O88545 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
Cops6O88545 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Cops6O88545 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Cops6O88545 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
Cops6O88545 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Cops6O88545 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC22.42■■□□□ 1.18
Cops6O88545 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Cops6O88545 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Cops6O88545 Rncr4-201ENSMUST00000194541 2234 ntBASIC22.41■■□□□ 1.18
Cops6O88545 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Cops6O88545 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Cops6O88545 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC22.41■■□□□ 1.18
Cops6O88545 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC22.41■■□□□ 1.18
Cops6O88545 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC22.41■■□□□ 1.18
Cops6O88545 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
Cops6O88545 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC22.41■■□□□ 1.18
Cops6O88545 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC22.41■■□□□ 1.18
Cops6O88545 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC22.41■■□□□ 1.18
Cops6O88545 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Cops6O88545 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Cops6O88545 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Cops6O88545 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
Cops6O88545 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Cops6O88545 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC22.4■■□□□ 1.18
Cops6O88545 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
Cops6O88545 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
Cops6O88545 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
Cops6O88545 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC22.4■■□□□ 1.18
Cops6O88545 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
Cops6O88545 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
Cops6O88545 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Cops6O88545 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Cops6O88545 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
Cops6O88545 Gm44544-201ENSMUST00000207052 1844 ntBASIC22.4■■□□□ 1.18
Cops6O88545 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Cops6O88545 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
Cops6O88545 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Cops6O88545 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Cops6O88545 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Cops6O88545 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC22.4■■□□□ 1.18
Cops6O88545 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Cops6O88545 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Cops6O88545 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
Cops6O88545 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms