Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cops4O88544 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
Cops4O88544 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Cops4O88544 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cops4O88544 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cops4O88544 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.9■□□□□ 0.3
Cops4O88544 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cops4O88544 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cops4O88544 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Cops4O88544 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.9■□□□□ 0.3
Cops4O88544 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC16.9■□□□□ 0.3
Cops4O88544 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cops4O88544 Gm7160-202ENSMUST00000188519 1027 ntBASIC16.9■□□□□ 0.3
Cops4O88544 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC16.9■□□□□ 0.3
Cops4O88544 Gm13241-201ENSMUST00000094493 780 ntBASIC16.9■□□□□ 0.3
Cops4O88544 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cops4O88544 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cops4O88544 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cops4O88544 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Cops4O88544 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Cops4O88544 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Cops4O88544 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
Cops4O88544 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Cops4O88544 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.89■□□□□ 0.3
Cops4O88544 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Cops4O88544 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cops4O88544 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cops4O88544 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
Cops4O88544 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC16.89■□□□□ 0.29
Cops4O88544 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cops4O88544 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cops4O88544 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Cops4O88544 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cops4O88544 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cops4O88544 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Cops4O88544 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cops4O88544 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cops4O88544 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Cops4O88544 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cops4O88544 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Cops4O88544 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cops4O88544 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.88■□□□□ 0.29
Cops4O88544 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cops4O88544 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cops4O88544 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Cops4O88544 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cops4O88544 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cops4O88544 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Cops4O88544 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC16.88■□□□□ 0.29
Cops4O88544 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cops4O88544 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Cops4O88544 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cops4O88544 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cops4O88544 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cops4O88544 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cops4O88544 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.88■□□□□ 0.29
Cops4O88544 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cops4O88544 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cops4O88544 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cops4O88544 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cops4O88544 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cops4O88544 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cops4O88544 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cops4O88544 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cops4O88544 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cops4O88544 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Cops4O88544 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cops4O88544 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC16.87■□□□□ 0.29
Cops4O88544 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cops4O88544 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC16.87■□□□□ 0.29
Cops4O88544 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Cops4O88544 Spcs1-204ENSMUST00000226782 949 ntBASIC16.87■□□□□ 0.29
Cops4O88544 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cops4O88544 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.87■□□□□ 0.29
Cops4O88544 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cops4O88544 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cops4O88544 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cops4O88544 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.87■□□□□ 0.29
Cops4O88544 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cops4O88544 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cops4O88544 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cops4O88544 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cops4O88544 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cops4O88544 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cops4O88544 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cops4O88544 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cops4O88544 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cops4O88544 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cops4O88544 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Cops4O88544 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cops4O88544 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.86■□□□□ 0.29
Cops4O88544 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cops4O88544 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cops4O88544 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cops4O88544 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cops4O88544 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cops4O88544 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cops4O88544 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cops4O88544 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.85■□□□□ 0.29
Cops4O88544 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms