Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfrsf17O88472 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfrsf17O88472 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfrsf17O88472 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Tnfrsf17O88472 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Tnfrsf17O88472 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Tnfrsf17O88472 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.05■□□□□ 0.32
Tnfrsf17O88472 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Tnfrsf17O88472 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Tnfrsf17O88472 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tnfrsf17O88472 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Tnfrsf17O88472 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tnfrsf17O88472 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.05■□□□□ 0.32
Tnfrsf17O88472 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.05■□□□□ 0.32
Tnfrsf17O88472 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.05■□□□□ 0.32
Tnfrsf17O88472 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tnfrsf17O88472 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Tnfrsf17O88472 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tnfrsf17O88472 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tnfrsf17O88472 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tnfrsf17O88472 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tnfrsf17O88472 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tnfrsf17O88472 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tnfrsf17O88472 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tnfrsf17O88472 Gm7153-201ENSMUST00000117092 455 ntBASIC17.04■□□□□ 0.32
Tnfrsf17O88472 Gm27463-201ENSMUST00000183569 57 ntBASIC17.04■□□□□ 0.32
Tnfrsf17O88472 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tnfrsf17O88472 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Tnfrsf17O88472 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tnfrsf17O88472 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tnfrsf17O88472 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tnfrsf17O88472 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tnfrsf17O88472 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tnfrsf17O88472 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.03■□□□□ 0.32
Tnfrsf17O88472 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tnfrsf17O88472 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tnfrsf17O88472 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tnfrsf17O88472 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tnfrsf17O88472 Gm27704-201ENSMUST00000185094 107 ntBASIC17.03■□□□□ 0.32
Tnfrsf17O88472 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.03■□□□□ 0.32
Tnfrsf17O88472 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tnfrsf17O88472 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tnfrsf17O88472 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Tnfrsf17O88472 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.03■□□□□ 0.32
Tnfrsf17O88472 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Tnfrsf17O88472 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tnfrsf17O88472 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Tnfrsf17O88472 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tnfrsf17O88472 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Tnfrsf17O88472 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tnfrsf17O88472 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
Tnfrsf17O88472 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Tnfrsf17O88472 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tnfrsf17O88472 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.02■□□□□ 0.32
Tnfrsf17O88472 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Tnfrsf17O88472 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.02■□□□□ 0.32
Tnfrsf17O88472 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.02■□□□□ 0.32
Tnfrsf17O88472 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.02■□□□□ 0.32
Tnfrsf17O88472 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Tnfrsf17O88472 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tnfrsf17O88472 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tnfrsf17O88472 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tnfrsf17O88472 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tnfrsf17O88472 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tnfrsf17O88472 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Tnfrsf17O88472 Gm32051-202ENSMUST00000197905 2385 ntBASIC17.02■□□□□ 0.31
Tnfrsf17O88472 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Tnfrsf17O88472 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Tnfrsf17O88472 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Tnfrsf17O88472 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tnfrsf17O88472 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Tnfrsf17O88472 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tnfrsf17O88472 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Tnfrsf17O88472 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tnfrsf17O88472 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tnfrsf17O88472 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.01■□□□□ 0.31
Tnfrsf17O88472 Gm2274-201ENSMUST00000184539 609 ntBASIC17.01■□□□□ 0.31
Tnfrsf17O88472 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tnfrsf17O88472 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tnfrsf17O88472 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Tnfrsf17O88472 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tnfrsf17O88472 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17■□□□□ 0.31
Tnfrsf17O88472 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tnfrsf17O88472 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC17■□□□□ 0.31
Tnfrsf17O88472 Umpk-ps-201ENSMUST00000211897 827 ntBASIC17■□□□□ 0.31
Tnfrsf17O88472 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17■□□□□ 0.31
Tnfrsf17O88472 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Tnfrsf17O88472 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tnfrsf17O88472 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tnfrsf17O88472 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tnfrsf17O88472 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Tnfrsf17O88472 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Tnfrsf17O88472 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Tnfrsf17O88472 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.99■□□□□ 0.31
Tnfrsf17O88472 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tnfrsf17O88472 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tnfrsf17O88472 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.99■□□□□ 0.31
Tnfrsf17O88472 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.99■□□□□ 0.31
Tnfrsf17O88472 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Tnfrsf17O88472 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms